Functional clusters
Information
- Type MapMan
- Description Phytohormone action.gibberellin.modification and degradation.gibberellin 2-oxidase (Ga2-Ox)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Erythranthe guttata | scaffold_13 | 1 | CH_egut_244 | 3 | 8 | 0.000015577 |
| Petunia axillaris | Peaxi162Scf00111 | 1 | CH_pax_83 | 3 | 3 | 0.0000000742514 |
| Solanum lycopersicum | SL4.0ch07 | 1 | CH_sly_440 | 3 | 17 | 0.0001964 |
| Solanum pennellii | Spenn-ch07 | 1 | CH_spe_207 | 3 | 8 | 0.00000581399 |
| Solanum tuberosum | ST4.03ch07 | 1 | CH_stu_179 | 3 | 3 | 0.000000137873 |
| Vitis vinifera | chr19 | 1 | CH_vvi_434 | 2 | 2 | 0.00076063 |
| Erythranthe guttata | scaffold_13 | 2 | CH_egut_244 | 3 | 8 | 0.000015577 |
| Petunia axillaris | Peaxi162Scf00111 | 2 | CH_pax_83 | 3 | 3 | 0.0000000742514 |
| Solanum lycopersicum | SL4.0ch07 | 2 | CH_sly_440 | 3 | 17 | 0.0001964 |
| Solanum pennellii | Spenn-ch07 | 2 | CH_spe_207 | 3 | 8 | 0.00000581399 |
| Solanum tuberosum | ST4.03ch07 | 2 | CH_stu_179 | 3 | 3 | 0.000000137873 |
| Vitis vinifera | chr19 | 2 | CH_vvi_434 | 2 | 2 | 0.00076063 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |