Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.biosynthesis

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR01 1 CH_aox_137 3 6 0.0000701606
Daucus carota DCARv2_Chr5 1 CH_dca_112 4 6 0.000000103275
Fragaria x ananassa Fvb3-1 1 CH_fan_321 3 3 0.0000246031
Oryza sativa ssp. japonica chr02 1 CH_osa_133 4 9 0.000000492028
Petunia axillaris Peaxi162Scf00045 1 CH_pax_104 5 33 0.000000369425
Solanum lycopersicum SL4.0ch08 1 CH_sly_216 4 12 0.00000218872
Aquilegia oxysepala CHR01 2 CH_aox_137 3 6 0.0000701606
Daucus carota DCARv2_Chr5 2 CH_dca_112 4 6 0.000000103275
Fragaria x ananassa Fvb3-1 2 CH_fan_321 3 3 0.0000246031
Oryza sativa ssp. japonica chr02 2 CH_osa_133 4 9 0.000000492028
Petunia axillaris Peaxi162Scf00045 2 CH_pax_104 5 33 0.000000369425
Solanum lycopersicum SL4.0ch08 2 CH_sly_216 4 12 0.00000218872

Available child term results

Ontology identifier Description Number of clusters
11.6.1.1 Phytohormone action.gibberellin.biosynthesis.ent-copalyl diphosphate synthase 30
11.6.1.2 Phytohormone action.gibberellin.biosynthesis.ent-kaurene synthase 33
11.6.1.3 Phytohormone action.gibberellin.biosynthesis.ent-kaurene oxidase 50
11.6.1.4 Phytohormone action.gibberellin.biosynthesis.ent-kaurenoic acid oxidase 43
11.6.1.5 Phytohormone action.gibberellin.biosynthesis.gibberellin 20-oxidase 15
11.6.1.6 Phytohormone action.gibberellin.biosynthesis.gibberellin 3-oxidase 61

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001