Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.biosynthesis.gibberellin 3-oxidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-4 1 CH_aar_211 2 2 0.000273698
Arabidopsis lyrata scaffold_2 1 CH_aly_368 2 2 0.000396027
Arabidopsis thaliana Chr1 1 CH_ath_313 2 2 0.000171895
Brassica carinata ChrB05 1 CH_bca_352 3 4 0.000000784066
Brassica oleracea C2 1 CH_bol_351 2 2 0.000326861
Brassica rapa A02 1 CH_bra_321 2 2 0.000429314
Camellia sinensis var. sinensis Chr2 1 CH_camsi_935 2 3 0.000825341
Cannabis sativa NC_044375.1 1 CH_cansat_341 2 2 0.000393985
Citrus clementina scaffold_7 1 CH_ccl_453 2 2 0.000492187
Cardamine hirsuta Chr2 1 CH_chi_368 2 2 0.000414723
Citrullus lanatus CG_Chr09 1 CH_cla_125 2 2 0.0000887115
Cucumis melo chr01 1 CH_cme_100 3 4 0.000000267009
Cucumis melo chr03 1 CH_cme_307 2 2 0.000667111
Capsella rubella scaffold_2 1 CH_cru_373 2 2 0.000438693
Cucumis sativus L. chr7 1 CH_csa_51 4 4 0.0000000000261789
Daucus carota DCARv2_Chr6 1 CH_dca_366 2 2 0.000382665
Erigeron canadensis Conyza_canadensis_scaffold:9 1 CH_eca_456 2 2 0.000448722
Eutrema salsugineum scaffold_9 1 CH_esa_281 2 2 0.000456899
Fragaria x ananassa Fvb2-4 1 CH_fan_265 3 6 0.00000575038
Fragaria vesca Fvb2 1 CH_fve_65 4 5 0.000000000107331
Helianthus annuus HanXRQChr12 1 CH_han_456 3 16 0.0000438589
Nelumbo nucifera chr8 1 CH_nnu_368 2 2 0.000261609
Nelumbo nucifera chr2 1 CH_nnu_369 2 2 0.000261609
Papaver somniferum NC_039365.1 1 CH_pso_673 2 3 0.000675676
Phaseolus vulgaris Chr09 1 CH_pvu_468 2 2 0.000734727
Sechium edule LG03 1 CH_sed_102 3 3 0.000000641322
Sechium edule LG09 1 CH_sed_103 3 3 0.000000641322
Schrenkiella parvula ch5-7 1 CH_spa_258 2 2 0.000472404
Tarenaya hassleriana NW_010965372.1 1 CH_tha_180 2 2 0.000419082
Vigna mungo CM024072.1 1 CH_vmu_396 2 2 0.000646141
Aethionema arabicum LG-4 2 CH_aar_211 2 2 0.000273698
Arabidopsis lyrata scaffold_2 2 CH_aly_368 2 2 0.000396027
Arabidopsis thaliana Chr1 2 CH_ath_313 2 2 0.000171895
Brassica carinata ChrB05 2 CH_bca_352 3 4 0.000000784066
Brassica oleracea C2 2 CH_bol_351 2 2 0.000326861
Brassica rapa A02 2 CH_bra_321 2 2 0.000429314
Camellia sinensis var. sinensis Chr2 2 CH_camsi_935 2 3 0.000825341
Cannabis sativa NC_044375.1 2 CH_cansat_341 2 2 0.000393985
Citrus clementina scaffold_7 2 CH_ccl_453 2 2 0.000492187
Cardamine hirsuta Chr2 2 CH_chi_368 2 2 0.000414723
Citrullus lanatus CG_Chr09 2 CH_cla_125 2 2 0.0000887115
Cucumis melo chr01 2 CH_cme_100 3 4 0.000000267009
Cucumis melo chr03 2 CH_cme_307 2 2 0.000667111
Capsella rubella scaffold_2 2 CH_cru_373 2 2 0.000438693
Cucumis sativus L. chr7 2 CH_csa_51 4 4 0.0000000000261789
Daucus carota DCARv2_Chr6 2 CH_dca_366 2 2 0.000382665
Erigeron canadensis Conyza_canadensis_scaffold:9 2 CH_eca_456 2 2 0.000448722
Eucalyptus grandis Chr03 2 CH_egr_330 4 11 0.00000000297586
Eutrema salsugineum scaffold_9 2 CH_esa_281 2 2 0.000456899
Fragaria x ananassa Fvb2-4 2 CH_fan_265 3 6 0.00000575038
Fragaria vesca Fvb2 2 CH_fve_65 4 5 0.000000000107331
Helianthus annuus HanXRQChr12 2 CH_han_456 3 16 0.0000438589
Nelumbo nucifera chr8 2 CH_nnu_368 2 2 0.000261609
Nelumbo nucifera chr2 2 CH_nnu_369 2 2 0.000261609
Papaver somniferum NC_039365.1 2 CH_pso_673 2 3 0.000675676
Phaseolus vulgaris Chr09 2 CH_pvu_468 2 2 0.000734727
Sechium edule LG03 2 CH_sed_102 3 3 0.000000641322
Sechium edule LG09 2 CH_sed_103 3 3 0.000000641322
Schrenkiella parvula ch5-7 2 CH_spa_258 2 2 0.000472404
Tarenaya hassleriana NW_010965372.1 2 CH_tha_180 2 2 0.000419082
Vigna mungo CM024072.1 2 CH_vmu_396 2 2 0.000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001