Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.abscisic acid.biosynthesis.abscisic aldehyde oxidase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr3 1 CH_acertr_41 4 7 0.0000000000367876
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 1 CH_arhy_464 2 2 0.000089815
Amborella trichopoda AmTr_v1.0_scaffold00004 1 CH_atr_332 2 2 0.000794407
Cannabis sativa NC_044375.1 1 CH_cansat_100 3 4 0.0000000258707
Capsicum annuum PGAv.1.6.scaffold439 1 CH_can_53 5 19 0.00000000000406035
Cicer arietinum L. Ca_LG2_v3 1 CH_car_211 2 3 0.000233481
Coffea canephora chr1 1 CH_ccan_100 3 16 0.000000853115
Coffea canephora chr0 1 CH_ccan_116 3 29 0.00000350355
Citrus clementina scaffold_8 1 CH_ccl_118 3 3 0.0000000100941
Carica papaya supercontig_103 1 CH_cpa_48 3 4 0.0000000542253
Cucumis sativus L. chr4 1 CH_csa_210 2 2 0.0000834759
Durio zibethinus NW_019168159.1 1 CH_dzi_42 4 6 0.0000000000224024
Erigeron canadensis Conyza_canadensis_scaffold:1 1 CH_eca_432 2 3 0.000403835
Erythranthe guttata scaffold_4 1 CH_egut_305 2 2 0.0000728147
Glycine max Gm02 1 CH_gma_486 2 3 0.000341591
Gossypium raimondii Chr09 1 CH_gra_460 2 3 0.000964932
Helianthus annuus HanXRQChr13 1 CH_han_482 2 3 0.000115926
Lotus japonicus Contig00564 1 CH_lja_144 3 5 0.000000306774
Lonicera japonica GWHAAZE00000002 1 CH_lonja_31 8 21 2.91971e-20
Magnolia biondii Chr11 1 CH_mbi_365 3 23 0.0000625834
Malus domestica Chr11 1 CH_mdo_564 2 2 0.000227527
Medicago truncatula chr5 1 CH_mtr_585 2 3 0.000123256
Petunia axillaris Peaxi162Scf00217 1 CH_pax_256 2 2 0.000211067
Punica granatum NC_045132.1 1 CH_pgr_214 2 2 0.0000750356
Pisum sativum chr2LG1 1 CH_psa_228 2 2 0.0000521635
Phaseolus vulgaris Chr08 1 CH_pvu_292 2 2 0.0000734727
Solanum lycopersicum SL4.0ch11 1 CH_sly_77 4 4 0.00000000000909983
Solanum pennellii Spenn-ch11 1 CH_spe_55 4 4 0.00000000000924027
Solanum pennellii Spenn-ch01 1 CH_spe_566 2 2 0.00093406
Solanum tuberosum ST4.03ch11 1 CH_stu_521 2 2 0.000307472
Theobroma cacao Chromosome_9 1 CH_tca_62 4 6 0.0000000000176786
Tarenaya hassleriana NW_010968505.1 1 CH_tha_178 2 3 0.000419082
Tarenaya hassleriana NW_010969548.1 1 CH_tha_179 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_scaf_756 1 CH_tpr_350 2 4 0.00045415
Tripterygium wilfordii NC_052253.1 1 CH_twi_267 2 3 0.000501733
Vigna mungo CM024073.1 1 CH_vmu_210 2 2 0.0000646141
Acer truncatum chr3 2 CH_acertr_41 4 7 0.0000000000367876
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 2 CH_arhy_464 2 2 0.000089815
Amborella trichopoda AmTr_v1.0_scaffold00004 2 CH_atr_332 2 2 0.000794407
Cannabis sativa NC_044375.1 2 CH_cansat_100 3 4 0.0000000258707
Capsicum annuum PGAv.1.6.scaffold439 2 CH_can_53 5 19 0.00000000000406035
Cicer arietinum L. Ca_LG2_v3 2 CH_car_211 2 3 0.000233481
Coffea canephora chr1 2 CH_ccan_100 3 16 0.000000853115
Coffea canephora chr0 2 CH_ccan_116 3 29 0.00000350355
Citrus clementina scaffold_8 2 CH_ccl_118 3 3 0.0000000100941
Carica papaya supercontig_103 2 CH_cpa_48 3 4 0.0000000542253
Cucumis sativus L. chr4 2 CH_csa_210 2 2 0.0000834759
Durio zibethinus NW_019168159.1 2 CH_dzi_42 4 6 0.0000000000224024
Erigeron canadensis Conyza_canadensis_scaffold:1 2 CH_eca_432 2 3 0.000403835
Erythranthe guttata scaffold_4 2 CH_egut_305 2 2 0.0000728147
Glycine max Gm02 2 CH_gma_486 2 3 0.000341591
Gossypium raimondii Chr09 2 CH_gra_460 2 3 0.000964932
Helianthus annuus HanXRQChr13 2 CH_han_482 2 3 0.000115926
Lotus japonicus Contig00564 2 CH_lja_144 3 5 0.000000306774
Lonicera japonica GWHAAZE00000002 2 CH_lonja_31 8 21 2.91971e-20
Magnolia biondii Chr11 2 CH_mbi_365 3 23 0.0000625834
Malus domestica Chr11 2 CH_mdo_564 2 2 0.000227527
Petunia axillaris Peaxi162Scf00217 2 CH_pax_256 2 2 0.000211067
Punica granatum NC_045132.1 2 CH_pgr_214 2 2 0.0000750356
Pisum sativum chr2LG1 2 CH_psa_228 2 2 0.0000521635
Phaseolus vulgaris Chr08 2 CH_pvu_292 2 2 0.0000734727
Solanum lycopersicum SL4.0ch11 2 CH_sly_77 4 4 0.00000000000909983
Solanum pennellii Spenn-ch11 2 CH_spe_55 4 4 0.00000000000924027
Solanum pennellii Spenn-ch01 2 CH_spe_566 2 2 0.00093406
Solanum tuberosum ST4.03ch11 2 CH_stu_521 2 2 0.000307472
Theobroma cacao Chromosome_9 2 CH_tca_62 4 6 0.0000000000176786
Tarenaya hassleriana NW_010968505.1 2 CH_tha_178 2 3 0.000419082
Tarenaya hassleriana NW_010969548.1 2 CH_tha_179 2 2 0.000419082
Trifolium pratense Tp57577_TGAC_v2_scaf_756 2 CH_tpr_350 2 4 0.00045415
Tripterygium wilfordii NC_052253.1 2 CH_twi_267 2 3 0.000501733
Vigna mungo CM024073.1 2 CH_vmu_210 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001