Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.biosynthesis.phospholipase A (DAD1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_319 2 2 0.000070497
Cannabis sativa NC_044370.1 1 CH_cansat_228 2 2 0.0000656642
Cicer arietinum L. Ca_LG3_v3 1 CH_car_212 2 3 0.000233481
Corylus avellana 1 1 CH_cav_263 2 2 0.0000766695
Citrus clementina scaffold_3 1 CH_ccl_318 2 2 0.0000820311
Carpinus fangiana Cfa04 1 CH_cfa_233 2 2 0.0000757346
Carya illinoinensis Chr13 1 CH_cil_488 2 2 0.000371897
Carya illinoinensis Chr14 1 CH_cil_489 2 2 0.000371897
Davidia involucrata GWHABJS00000020 1 CH_din_347 2 2 0.000150038
Durio zibethinus NW_019167938.1 1 CH_dzi_314 2 3 0.000417124
Erythranthe guttata scaffold_2 1 CH_egut_306 2 2 0.0000728147
Manihot esculenta Chromosome01 1 CH_mes_423 2 2 0.000366379
Olea europaea chr3 1 CH_oeu_20 4 5 0.0000000000114073
Prunus persica Pp02 1 CH_ppe_341 2 2 0.0000745962
Populus trichocarpa Chr14 1 CH_ptr_382 2 2 0.0001734
Phaseolus vulgaris Chr08 1 CH_pvu_120 3 3 0.0000000323906
Quercus lobata 4 1 CH_qlo_678 2 2 0.0000516289
Salvia bowleyana GWHASIU00000003 1 CH_sbo_380 2 2 0.000272988
Solanum lycopersicum SL4.0ch05 1 CH_sly_482 2 2 0.000352164
Solanum tuberosum ST4.03ch05 1 CH_stu_159 3 3 0.0000000393922
Trochodendron aralioides group1 1 CH_tar_361 2 2 0.00018011
Theobroma cacao Chromosome_1 1 CH_tca_289 2 2 0.0000732386
Vitis vinifera chr15 1 CH_vvi_278 2 2 0.000076063
Acer truncatum chr5 2 CH_acertr_319 2 2 0.000070497
Cannabis sativa NC_044370.1 2 CH_cansat_228 2 2 0.0000656642
Cicer arietinum L. Ca_LG3_v3 2 CH_car_212 2 3 0.000233481
Corylus avellana 1 2 CH_cav_263 2 2 0.0000766695
Citrus clementina scaffold_3 2 CH_ccl_318 2 2 0.0000820311
Carpinus fangiana Cfa04 2 CH_cfa_233 2 2 0.0000757346
Carya illinoinensis Chr13 2 CH_cil_488 2 2 0.000371897
Carya illinoinensis Chr14 2 CH_cil_489 2 2 0.000371897
Davidia involucrata GWHABJS00000020 2 CH_din_347 2 2 0.000150038
Durio zibethinus NW_019167938.1 2 CH_dzi_314 2 3 0.000417124
Eucalyptus grandis Chr05 2 CH_egr_786 2 2 0.000175582
Erythranthe guttata scaffold_2 2 CH_egut_306 2 2 0.0000728147
Manihot esculenta Chromosome01 2 CH_mes_423 2 2 0.000366379
Olea europaea chr3 2 CH_oeu_20 4 5 0.0000000000114073
Prunus persica Pp02 2 CH_ppe_341 2 2 0.0000745962
Populus trichocarpa Chr14 2 CH_ptr_382 2 2 0.0001734
Phaseolus vulgaris Chr08 2 CH_pvu_120 3 3 0.0000000323906
Quercus lobata 4 2 CH_qlo_678 2 2 0.0000516289
Salvia bowleyana GWHASIU00000003 2 CH_sbo_380 2 2 0.000272988
Solanum lycopersicum SL4.0ch05 2 CH_sly_482 2 2 0.000352164
Solanum tuberosum ST4.03ch05 2 CH_stu_159 3 3 0.0000000393922
Trochodendron aralioides group1 2 CH_tar_361 2 2 0.00018011
Theobroma cacao Chromosome_1 2 CH_tca_289 2 2 0.0000732386
Vitis vinifera chr15 2 CH_vvi_278 2 2 0.000076063

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001