Functional clusters
Information
- Type MapMan
- Description Phytohormone action.cytokinin.perception and signal transduction.signalling pathway activator (CKI1)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Capsicum annuum | PGAv.1.6.scaffold484 | 1 | CH_can_322 | 2 | 3 | 0.000247821 |
Erythranthe guttata | scaffold_11 | 1 | CH_egut_51 | 6 | 18 | 0.000000000000394225 |
Fragaria x ananassa | Fvb2-1 | 1 | CH_fan_595 | 2 | 2 | 0.00066613 |
Manihot esculenta | Chromosome09 | 1 | CH_mes_343 | 2 | 3 | 0.000183184 |
Punica granatum | NC_045132.1 | 1 | CH_pgr_215 | 2 | 2 | 0.0000750356 |
Capsicum annuum | PGAv.1.6.scaffold484 | 2 | CH_can_322 | 2 | 3 | 0.000247821 |
Erythranthe guttata | scaffold_11 | 2 | CH_egut_51 | 6 | 18 | 0.000000000000394225 |
Fragaria x ananassa | Fvb2-1 | 2 | CH_fan_595 | 2 | 2 | 0.00066613 |
Gossypium hirsutum | A12 | 2 | CH_ghi_628 | 2 | 2 | 0.000267016 |
Manihot esculenta | Chromosome09 | 2 | CH_mes_343 | 2 | 3 | 0.000183184 |
Punica granatum | NC_045132.1 | 2 | CH_pgr_215 | 2 | 2 | 0.0000750356 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |