Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.conjugation and degradation.jasmonoyl-amino acid synthetase (JAR1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cicer arietinum L. Ca_LG3_v3 1 CH_car_229 2 2 0.00023349
Chenopodium quinoa C_Quinoa_Scaffold_4250 1 CH_cqu_435 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1606 1 CH_cqu_436 2 2 0.000284293
Erigeron canadensis Conyza_canadensis_scaffold:4 1 CH_eca_392 2 2 0.000269233
Gossypium raimondii Chr07 1 CH_gra_358 2 2 0.000321664
Lupinus albus Lalb_Chr10 1 CH_lal_119 3 8 0.000002313
Medicago truncatula chr8 1 CH_mtr_135 4 6 0.0000000000156052
Nicotiana tabacum Nitab4.5_0000522 1 CH_nta_144 2 2 0.000329182
Solanum lycopersicum SL4.0ch00 1 CH_sly_241 3 6 0.00000867743
Solanum lycopersicum SL4.0ch10 1 CH_sly_242 3 6 0.00000867743
Solanum pennellii Spenn-ch10 1 CH_spe_506 2 2 0.000667186
Solanum pennellii Spenn-ch06 1 CH_spe_507 2 2 0.000667186
Cicer arietinum L. Ca_LG3_v3 2 CH_car_229 2 2 0.00023349
Chenopodium quinoa C_Quinoa_Scaffold_4250 2 CH_cqu_435 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_1606 2 CH_cqu_436 2 2 0.000284293
Erigeron canadensis Conyza_canadensis_scaffold:4 2 CH_eca_392 2 2 0.000269233
Gossypium hirsutum A11 2 CH_ghi_835 2 2 0.000747644
Gossypium hirsutum D11 2 CH_ghi_836 2 2 0.000747644
Gossypium raimondii Chr07 2 CH_gra_358 2 2 0.000321664
Lupinus albus Lalb_Chr10 2 CH_lal_119 3 8 0.000002313
Nicotiana tabacum Nitab4.5_0000522 2 CH_nta_144 2 2 0.000329182
Solanum lycopersicum SL4.0ch00 2 CH_sly_241 3 6 0.00000867743
Solanum lycopersicum SL4.0ch10 2 CH_sly_242 3 6 0.00000867743
Solanum pennellii Spenn-ch10 2 CH_spe_506 2 2 0.000667186
Solanum pennellii Spenn-ch06 2 CH_spe_507 2 2 0.000667186

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001