Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine precursor polypeptide (PSK)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Camellia sinensis var. sinensis Chr9 1 CH_camsi_311 4 16 0.000000375579
Capsicum annuum PGAv.1.6.scaffold1343 1 CH_can_442 2 2 0.000826105
Ceratophyllum demersum 2 1 CH_cde_269 2 2 0.000789796
Ceratophyllum demersum 5 1 CH_cde_270 2 2 0.000789796
Capsella rubella scaffold_4 1 CH_cru_350 3 13 0.000274587
Cucumis sativus L. chr1 1 CH_csa_104 4 12 0.0000000603884
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_517 2 2 0.000942317
Rhododendron simsii chr08 1 CH_rsi_279 3 6 0.0000104886
Simmondsia chinensis GWHAASQ00000012 1 CH_sci_299 2 2 0.000851426
Sapria himalayana scaffold9_16683904 1 CH_shi_143 2 3 0.000171536
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_414 2 2 0.000929238
Camellia sinensis var. sinensis Chr9 2 CH_camsi_311 4 16 0.000000375579
Capsicum annuum PGAv.1.6.scaffold1343 2 CH_can_442 2 2 0.000826105
Ceratophyllum demersum 2 2 CH_cde_269 2 2 0.000789796
Ceratophyllum demersum 5 2 CH_cde_270 2 2 0.000789796
Capsella rubella scaffold_4 2 CH_cru_350 3 13 0.000274587
Cucumis sativus L. chr1 2 CH_csa_104 4 12 0.0000000603884
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_517 2 2 0.000942317
Rhododendron simsii chr08 2 CH_rsi_279 3 6 0.0000104886
Simmondsia chinensis GWHAASQ00000012 2 CH_sci_299 2 2 0.000851426
Sapria himalayana scaffold9_16683904 2 CH_shi_143 2 3 0.000171536
Vaccinium macrocarpon chr1_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_414 2 2 0.000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001