Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.biosynthesis.allene oxidase cyclase (AOC)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_5 1 CH_aly_94 3 3 0.0000000261404
Arabidopsis thaliana Chr3 1 CH_ath_104 3 4 0.0000000196984
Brassica carinata ChrC04 1 CH_bca_1140 2 3 0.000961902
Brassica oleracea C7 1 CH_bol_352 2 2 0.000326861
Brassica oleracea C9 1 CH_bol_444 2 3 0.000980536
Brassica rapa A06 1 CH_bra_322 2 2 0.000429314
Camellia sinensis var. sinensis Chr1 1 CH_camsi_828 2 2 0.000458547
Cannabis sativa NC_044379.1 1 CH_cansat_300 2 2 0.000196993
Corylus avellana 5 1 CH_cav_264 2 2 0.0000766695
Citrus clementina scaffold_6 1 CH_ccl_395 2 2 0.000246093
Carpinus fangiana Cfa03 1 CH_cfa_93 3 3 0.0000000344157
Cardamine hirsuta Chr5 1 CH_chi_304 2 2 0.000207361
Carya illinoinensis Chr03 1 CH_cil_429 2 2 0.000185948
Chenopodium quinoa C_Quinoa_Scaffold_1995 1 CH_cqu_558 2 2 0.000710732
Capsella rubella scaffold_5 1 CH_cru_113 3 3 0.0000000320764
Davidia involucrata GWHABJS00000012 1 CH_din_422 2 2 0.000300075
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_271 2 2 0.0000448722
Erythranthe guttata scaffold_5 1 CH_egut_367 2 2 0.000218444
Eutrema salsugineum scaffold_6 1 CH_esa_308 2 3 0.000685305
Gossypium hirsutum A08 1 CH_ghi_106 4 4 0.0000000000119941
Gossypium hirsutum D08 1 CH_ghi_107 4 4 0.0000000000119941
Gossypium raimondii Chr04 1 CH_gra_57 4 4 0.00000000000231143
Pisum sativum chr3LG5 1 CH_psa_424 2 4 0.000938861
Quercus lobata CM012294 1 CH_qlo_361 3 3 0.0000000159937
Salix brachista GWHAAZH00000004 1 CH_sbr_289 2 2 0.000189042
Schrenkiella parvula ch2-4 1 CH_spa_274 2 3 0.000708559
Selenicereus undatus Scaffold_3410 1 CH_sun_205 2 2 0.000217992
Arabidopsis lyrata scaffold_5 2 CH_aly_94 3 3 0.0000000261404
Arabidopsis thaliana Chr3 2 CH_ath_104 3 4 0.0000000196984
Brassica carinata ChrC04 2 CH_bca_1140 2 3 0.000961902
Brassica oleracea C7 2 CH_bol_352 2 2 0.000326861
Brassica oleracea C9 2 CH_bol_444 2 3 0.000980536
Brassica rapa A06 2 CH_bra_322 2 2 0.000429314
Camellia sinensis var. sinensis Chr1 2 CH_camsi_828 2 2 0.000458547
Cannabis sativa NC_044379.1 2 CH_cansat_300 2 2 0.000196993
Corylus avellana 5 2 CH_cav_264 2 2 0.0000766695
Citrus clementina scaffold_6 2 CH_ccl_395 2 2 0.000246093
Carpinus fangiana Cfa03 2 CH_cfa_93 3 3 0.0000000344157
Cardamine hirsuta Chr5 2 CH_chi_304 2 2 0.000207361
Carya illinoinensis Chr03 2 CH_cil_429 2 2 0.000185948
Chenopodium quinoa C_Quinoa_Scaffold_1995 2 CH_cqu_558 2 2 0.000710732
Capsella rubella scaffold_5 2 CH_cru_113 3 3 0.0000000320764
Davidia involucrata GWHABJS00000012 2 CH_din_422 2 2 0.000300075
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_271 2 2 0.0000448722
Erythranthe guttata scaffold_5 2 CH_egut_367 2 2 0.000218444
Eutrema salsugineum scaffold_6 2 CH_esa_308 2 3 0.000685305
Gossypium hirsutum A08 2 CH_ghi_106 4 4 0.0000000000119941
Gossypium hirsutum D08 2 CH_ghi_107 4 4 0.0000000000119941
Gossypium raimondii Chr04 2 CH_gra_57 4 4 0.00000000000231143
Pisum sativum chr3LG5 2 CH_psa_424 2 4 0.000938861
Quercus lobata CM012294 2 CH_qlo_361 3 3 0.0000000159937
Salix brachista GWHAAZH00000004 2 CH_sbr_289 2 2 0.000189042
Schrenkiella parvula ch2-4 2 CH_spa_274 2 3 0.000708559
Selenicereus undatus Scaffold_3410 2 CH_sun_205 2 2 0.000217992

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001