Functional clusters
Information
- Type MapMan
- Description Phytohormone action.salicylic acid.perception and signal transduction.receptor protein (NPR3/4)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrus clementina | scaffold_4 | 1 | CH_ccl_213 | 3 | 14 | 0.00000367258 |
Fragaria vesca | Fvb6 | 1 | CH_fve_433 | 2 | 3 | 0.000530165 |
Malus domestica | Chr10 | 1 | CH_mdo_688 | 2 | 2 | 0.000568817 |
Malus domestica | Chr05 | 1 | CH_mdo_689 | 2 | 2 | 0.000568817 |
Populus trichocarpa | Chr12 | 1 | CH_ptr_509 | 2 | 2 | 0.000578001 |
Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_705 | 2 | 3 | 0.000358775 |
Citrus clementina | scaffold_4 | 2 | CH_ccl_213 | 3 | 14 | 0.00000367258 |
Fragaria vesca | Fvb6 | 2 | CH_fve_433 | 2 | 3 | 0.000530165 |
Malus domestica | Chr10 | 2 | CH_mdo_688 | 2 | 2 | 0.000568817 |
Malus domestica | Chr05 | 2 | CH_mdo_689 | 2 | 2 | 0.000568817 |
Populus trichocarpa | Chr12 | 2 | CH_ptr_509 | 2 | 2 | 0.000578001 |
Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_705 | 2 | 3 | 0.000358775 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |