Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.ethylene.perception and signal transduction.signal modulator (ARGOS)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_4 1 CH_aly_421 2 2 0.000660044
Brassica carinata ChrB01 1 CH_bca_675 3 11 0.000109469
Cucumis melo chr08 1 CH_cme_306 2 2 0.000667111
Capsella rubella scaffold_4 1 CH_cru_420 2 2 0.000731154
Lupinus albus Lalb_Chr20 1 CH_lal_367 2 2 0.000524824
Manihot esculenta Chromosome09 1 CH_mes_104 4 4 0.000000000338145
Manihot esculenta Chromosome08 1 CH_mes_154 4 8 0.0000000236488
Prunus persica Pp07 1 CH_ppe_177 3 3 0.0000000834721
Populus trichocarpa Chr16 1 CH_ptr_235 3 3 0.0000022802
Populus trichocarpa Chr06 1 CH_ptr_32 7 8 1.51199e-19
Sequoiadendron giganteum chr3 1 CH_sgi_1194 2 4 0.000292277
Schrenkiella parvula ch4-6 1 CH_spa_273 2 3 0.000708559
Arabidopsis lyrata scaffold_4 2 CH_aly_421 2 2 0.000660044
Brassica carinata ChrB01 2 CH_bca_675 3 11 0.000109469
Cucumis melo chr08 2 CH_cme_306 2 2 0.000667111
Capsella rubella scaffold_4 2 CH_cru_420 2 2 0.000731154
Lupinus albus Lalb_Chr20 2 CH_lal_367 2 2 0.000524824
Manihot esculenta Chromosome09 2 CH_mes_104 4 4 0.000000000338145
Manihot esculenta Chromosome08 2 CH_mes_154 4 8 0.0000000236488
Prunus persica Pp07 2 CH_ppe_177 3 3 0.0000000834721
Populus trichocarpa Chr16 2 CH_ptr_235 3 3 0.0000022802
Populus trichocarpa Chr06 2 CH_ptr_32 7 8 1.51199e-19
Sequoiadendron giganteum chr3 2 CH_sgi_1194 2 4 0.000292277
Schrenkiella parvula ch4-6 2 CH_spa_273 2 3 0.000708559

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001