Functional clusters
Information
- Type MapMan
- Description Phytohormone action.auxin.perception and signal transduction.transcriptional repressor (IAA/AUX)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr5 | 1 | CH_acertr_372 | 3 | 5 | 0.000171254 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 1 | CH_amhyb_7 | 6 | 6 | 0.00000000000000516173 |
| Brassica oleracea | C1 | 1 | CH_bol_450 | 3 | 6 | 0.000986951 |
| Cicer arietinum L. | Ca_LG3_v3 | 1 | CH_car_104 | 3 | 3 | 0.00000880495 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 1 | CH_cqu_122 | 4 | 4 | 0.0000000167107 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3820 | 1 | CH_cqu_147 | 4 | 5 | 0.0000000835026 |
| Durio zibethinus | NW_019167849.1 | 1 | CH_dzi_394 | 3 | 5 | 0.000891563 |
| Durio zibethinus | NW_019168004.1 | 1 | CH_dzi_54 | 5 | 6 | 0.000000000792563 |
| Papaver somniferum | NC_039365.1 | 1 | CH_pso_182 | 4 | 5 | 0.0000000140929 |
| Papaver somniferum | NW_020624154.1 | 1 | CH_pso_443 | 3 | 5 | 0.0000694999 |
| Quercus lobata | 6 | 1 | CH_qlo_833 | 4 | 31 | 0.000162316 |
| Selenicereus undatus | Scaffold_33676 | 1 | CH_sun_166 | 3 | 5 | 0.000160113 |
| Acer truncatum | chr5 | 2 | CH_acertr_372 | 3 | 5 | 0.000171254 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_6 | 2 | CH_amhyb_7 | 6 | 6 | 0.00000000000000516173 |
| Brassica oleracea | C1 | 2 | CH_bol_450 | 3 | 6 | 0.000986951 |
| Cicer arietinum L. | Ca_LG3_v3 | 2 | CH_car_104 | 3 | 3 | 0.00000880495 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2088 | 2 | CH_cqu_122 | 4 | 4 | 0.0000000167107 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3820 | 2 | CH_cqu_147 | 4 | 5 | 0.0000000835026 |
| Durio zibethinus | NW_019167849.1 | 2 | CH_dzi_394 | 3 | 5 | 0.000891563 |
| Durio zibethinus | NW_019168004.1 | 2 | CH_dzi_54 | 5 | 6 | 0.000000000792563 |
| Papaver somniferum | NC_039365.1 | 2 | CH_pso_182 | 4 | 5 | 0.0000000140929 |
| Papaver somniferum | NW_020624154.1 | 2 | CH_pso_443 | 3 | 5 | 0.0000694999 |
| Quercus lobata | 6 | 2 | CH_qlo_833 | 4 | 31 | 0.000162316 |
| Selenicereus undatus | Scaffold_33676 | 2 | CH_sun_166 | 3 | 5 | 0.000160113 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |