Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.signalling peptides

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold162 1 CH_can_455 4 9 0.000926817
Corylus avellana 3 1 CH_cav_217 4 4 0.0000571934
Fragaria vesca Fvb1 1 CH_fve_206 5 7 0.00000203663
Lactuca sativa Lsat_1_v8_lg_4 1 CH_lsa_67 10 20 0.00000000000221547
Olea europaea chr18 1 CH_oeu_57 5 5 0.000000030339
Solanum pennellii Spenn-ch07 1 CH_spe_523 7 70 0.000799144
Capsicum annuum PGAv.1.6.scaffold162 2 CH_can_455 4 9 0.000926817
Corylus avellana 3 2 CH_cav_217 4 4 0.0000571934
Fragaria vesca Fvb1 2 CH_fve_206 5 7 0.00000203663
Lactuca sativa Lsat_1_v8_lg_4 2 CH_lsa_67 10 20 0.00000000000221547
Olea europaea chr18 2 CH_oeu_57 5 5 0.000000030339
Solanum pennellii Spenn-ch07 2 CH_spe_523 7 70 0.000799144

Available child term results

Ontology identifier Description Number of clusters
11.10.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category 6
11.10.1.1.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL-precursor polypeptide 75
11.10.1.1.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PIP/PIPL-peptide activity.PIP/PIPL peptide receptor (RLK7) 6
11.10.1.10.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-peptide activity.CLE-precursor polypeptide 69
11.10.1.11.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IMA/FEP-peptide activity.IMA/FEP precursor polypeptide 57
11.10.1.12.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PNP-peptide activity.PNP precursor polypeptide 115
11.10.1.12.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.PNP-peptide activity.PNP peptide receptor (PNP-R) 22
11.10.1.2.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine precursor polypeptide (PSK) 22
11.10.1.2.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.phytosulfokine activity.pythosulfokine peptide receptor (PSKR) 31
11.10.1.3.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-precursor polypeptide 153
11.10.1.3.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CEP-peptide activity.CEP-peptide receptor (CEPR) 4
11.10.1.4.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.TWS-precursor polypeptide (TWS1) 16
11.10.1.4.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.CIF-precursor polypeptide 8
11.10.1.4.3 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CIF-peptide activity.CIF/TWS1-peptide receptor (GSO) 2
11.10.1.5.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IDL-peptide activity.IDA/IDL-precursor polypeptide 4
11.10.1.5.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IDL-peptide activity.IDA/IDL-peptide receptor (HAESA) 4
11.10.1.6.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.DVL/ROT-peptide activity.DVL/RTFL-precursor polypeptide 10
11.10.1.7 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity 2
11.10.1.7.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity.TDL-precursor polypeptide 20
11.10.1.7.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.TDL-peptide activity.TDL-peptide receptor (EMS1/MSP1) 2
11.10.1.8.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-precursor polypeptide 10
11.10.1.8.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-peptide receptor (RGFR) 2
11.10.1.9 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-TDIF-peptide activity 2
11.10.1.9.1 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.CLE-TDIF-peptide activity.TDIF-precursor polypeptide 1
11.10.2.1.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.GASA/GAST-peptide activity.GASA-precursor polypeptide 83
11.10.2.2.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.STIG1-peptide activity.STIG1/GRI-precursor polypeptide 126
11.10.2.3.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.EPF/EPFL-peptide activity.EPF/EPFL-precursor polypeptide 4
11.10.2.4 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity 10
11.10.2.4.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.RALF/RALFL-precursor polypeptide 88
11.10.2.4.2 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.RALF-peptide receptor (CrRLK1L) 115
11.10.2.4.3 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.RALF/RALFL-peptide activity.receptor CrRLK1L chaperone (LLG) 50
11.10.2.5.1 Phytohormone action.signalling peptides.CRP (cysteine-rich-peptide) category.EC1-peptide activity.EC1-precursor polypeptide 58

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001