Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.gibberellin.biosynthesis.ent-copalyl diphosphate synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_340 1 CH_aag_120 3 7 0.000189051
Erythranthe guttata scaffold_14 1 CH_egut_207 3 3 0.00000131229
Fragaria x ananassa Fvb2-4 1 CH_fan_167 3 4 0.000000338941
Fragaria vesca Fvb2 1 CH_fve_155 3 8 0.00000029148
Glycine max Gm03 1 CH_gma_487 2 3 0.000341591
Lupinus albus Lalb_Chr20 1 CH_lal_205 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 1 CH_lonja_51 6 14 3.64293e-16
Phaseolus vulgaris Chr01 1 CH_pvu_336 2 3 0.00022041
Sequoiadendron giganteum chr2 1 CH_sgi_181 7 25 0.0000000000000253748
Tripterygium wilfordii NC_052248.1 1 CH_twi_94 3 3 0.0000000932468
Utricularia gibba unitig_748 1 CH_ugi_217 2 2 0.000220378
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_432 2 2 0.000929238
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_433 2 2 0.000929238
Vigna mungo CM024070.1 1 CH_vmu_264 2 3 0.000193836
Vitis vinifera chr7 1 CH_vvi_320 2 3 0.00022818
Anthoceros agrestis Sc2ySwM_340 2 CH_aag_120 3 7 0.000189051
Erythranthe guttata scaffold_14 2 CH_egut_207 3 3 0.00000131229
Fragaria x ananassa Fvb2-4 2 CH_fan_167 3 4 0.000000338941
Fragaria vesca Fvb2 2 CH_fve_155 3 8 0.00000029148
Glycine max Gm03 2 CH_gma_487 2 3 0.000341591
Lupinus albus Lalb_Chr20 2 CH_lal_205 2 2 0.0000524824
Lonicera japonica GWHAAZE00000001 2 CH_lonja_51 6 14 3.64293e-16
Phaseolus vulgaris Chr01 2 CH_pvu_336 2 3 0.00022041
Sequoiadendron giganteum chr2 2 CH_sgi_181 7 25 0.0000000000000253748
Tripterygium wilfordii NC_052248.1 2 CH_twi_94 3 3 0.0000000932468
Utricularia gibba unitig_748 2 CH_ugi_217 2 2 0.000220378
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_432 2 2 0.000929238
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_433 2 2 0.000929238
Vigna mungo CM024070.1 2 CH_vmu_264 2 3 0.000193836
Vitis vinifera chr7 2 CH_vvi_320 2 3 0.00022818

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001