Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.jasmonic acid.biosynthesis.oxophytodienoate reductase (OPR3)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044371.1 1 CH_cansat_66 4 9 0.000000000107016
Eucalyptus grandis Chr03 1 CH_egr_203 5 10 0.000000000000465614
Fragaria x ananassa Fvb1-4 1 CH_fan_181 3 5 0.000000616225
Fragaria x ananassa Fvb1-3 1 CH_fan_628 2 2 0.000832663
Fragaria vesca Fvb1 1 CH_fve_130 3 5 0.0000000520546
Glycine max Gm13 1 CH_gma_452 2 2 0.000227734
Glycine max Gm17 1 CH_gma_453 2 2 0.000227734
Punica granatum NC_045134.1 1 CH_pgr_126 3 5 0.000000337789
Phaseolus vulgaris Chr03 1 CH_pvu_293 2 2 0.0000734727
Quercus lobata 11 1 CH_qlo_867 2 4 0.000309757
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_593 2 2 0.000119596
Salix brachista GWHAAZH00000006 1 CH_sbr_290 2 2 0.000189042
Sequoiadendron giganteum chr11 1 CH_sgi_471 4 8 0.0000000242826
Sequoiadendron giganteum chr10 1 CH_sgi_79 8 12 3.04841e-22
Selenicereus undatus Scaffold_33677 1 CH_sun_281 2 2 0.000726639
Tarenaya hassleriana NW_010964923.1 1 CH_tha_148 2 2 0.000209541
Vigna mungo CM024074.1 1 CH_vmu_211 2 2 0.0000646141
Cannabis sativa NC_044371.1 2 CH_cansat_66 4 9 0.000000000107016
Eucalyptus grandis Chr03 2 CH_egr_203 5 10 0.000000000000465614
Fragaria x ananassa Fvb1-4 2 CH_fan_181 3 5 0.000000616225
Fragaria x ananassa Fvb1-3 2 CH_fan_628 2 2 0.000832663
Fragaria vesca Fvb1 2 CH_fve_130 3 5 0.0000000520546
Glycine max Gm13 2 CH_gma_452 2 2 0.000227734
Glycine max Gm17 2 CH_gma_453 2 2 0.000227734
Lotus japonicus chr4 2 CH_lja_272 2 2 0.0000715077
Punica granatum NC_045134.1 2 CH_pgr_126 3 5 0.000000337789
Phaseolus vulgaris Chr03 2 CH_pvu_293 2 2 0.0000734727
Quercus lobata 11 2 CH_qlo_867 2 4 0.000309757
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_593 2 2 0.000119596
Salix brachista GWHAAZH00000006 2 CH_sbr_290 2 2 0.000189042
Sequoiadendron giganteum chr11 2 CH_sgi_471 4 8 0.0000000242826
Sequoiadendron giganteum chr10 2 CH_sgi_79 8 12 3.04841e-22
Selenicereus undatus Scaffold_33677 2 CH_sun_281 2 2 0.000726639
Tarenaya hassleriana NW_010964923.1 2 CH_tha_148 2 2 0.000209541
Vigna mungo CM024074.1 2 CH_vmu_211 2 2 0.0000646141

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001