Functional clusters
Information
- Type MapMan
- Description Phytohormone action.gibberellin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (SLY)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Brassica carinata | ChrB04 | 1 | CH_bca_401 | 3 | 7 | 0.00000287806 |
| Coffea canephora | chr5 | 1 | CH_ccan_292 | 2 | 7 | 0.000268306 |
| Gossypium raimondii | Chr01 | 1 | CH_gra_443 | 2 | 2 | 0.00080416 |
| Nelumbo nucifera | chr5 | 1 | CH_nnu_101 | 3 | 3 | 0.0000000998094 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_1003 | 3 | 10 | 0.000121997 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_434 | 5 | 31 | 0.00000000919331 |
| Brassica carinata | ChrB04 | 2 | CH_bca_401 | 3 | 7 | 0.00000287806 |
| Coffea canephora | chr5 | 2 | CH_ccan_292 | 2 | 7 | 0.000268306 |
| Gossypium raimondii | Chr01 | 2 | CH_gra_443 | 2 | 2 | 0.00080416 |
| Nelumbo nucifera | chr5 | 2 | CH_nnu_101 | 3 | 3 | 0.0000000998094 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_1003 | 3 | 10 | 0.000121997 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_434 | 5 | 31 | 0.00000000919331 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |