Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin.perception and signal transduction.substrate adaptor of SCF ubiquitin ligase (TIR1/AFB)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-10 1 CH_aar_209 2 3 0.000273698
Acer truncatum chr10 1 CH_acertr_558 2 2 0.00070497
Citrullus lanatus CG_Chr11 1 CH_cla_223 2 2 0.000887115
Cucumis melo chr04 1 CH_cme_304 2 2 0.000667111
Corchorus olitorius AWUE01020860.1 1 CH_col_118 2 2 0.000876296
Physcomitrium patens Chr24 1 CH_ppa_298 2 2 0.000612726
Theobroma cacao Chromosome_6 1 CH_tca_440 2 2 0.000732386
Aethionema arabicum LG-10 2 CH_aar_209 2 3 0.000273698
Acer truncatum chr10 2 CH_acertr_558 2 2 0.00070497
Citrullus lanatus CG_Chr11 2 CH_cla_223 2 2 0.000887115
Cucumis melo chr04 2 CH_cme_304 2 2 0.000667111
Corchorus olitorius AWUE01020860.1 2 CH_col_118 2 2 0.000876296
Physcomitrium patens Chr24 2 CH_ppa_298 2 2 0.000612726
Theobroma cacao Chromosome_6 2 CH_tca_440 2 2 0.000732386

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001