Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.ethylene.biosynthesis.1-aminocyclopropane-1-carboxylate (ACC) synthase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 1 CH_amhyb_270 2 2 0.000841751
Aquilegia oxysepala CHR05 1 CH_aox_290 2 2 0.000481193
Helianthus annuus HanXRQChr15 1 CH_han_356 3 5 0.0000081505
Olea europaea chr3 1 CH_oeu_108 3 6 0.00000478514
Papaver somniferum NC_039364.1 1 CH_pso_96 5 8 0.00000000000219856
Papaver somniferum NC_039367.1 1 CH_pso_97 5 8 0.00000000000219856
Quercus lobata 12 1 CH_qlo_972 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_761 2 2 0.000597979
Sequoiadendron giganteum chr5 1 CH_sgi_137 6 10 1.08882e-16
Sequoiadendron giganteum chr9 1 CH_sgi_596 3 4 0.00000119594
Amaranthus hybridus AmaHy_arrow1_Scaffold_12 2 CH_amhyb_270 2 2 0.000841751
Aquilegia oxysepala CHR05 2 CH_aox_290 2 2 0.000481193
Eucalyptus grandis Chr04 2 CH_egr_420 3 3 0.0000000513834
Helianthus annuus HanXRQChr15 2 CH_han_356 3 5 0.0000081505
Olea europaea chr3 2 CH_oeu_108 3 6 0.00000478514
Papaver somniferum NC_039364.1 2 CH_pso_96 5 8 0.00000000000219856
Papaver somniferum NC_039367.1 2 CH_pso_97 5 8 0.00000000000219856
Quercus lobata 12 2 CH_qlo_972 2 2 0.000516289
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_761 2 2 0.000597979
Sequoiadendron giganteum chr5 2 CH_sgi_137 6 10 1.08882e-16
Sequoiadendron giganteum chr9 2 CH_sgi_596 3 4 0.00000119594

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001