Functional clusters
Information
- Type MapMan
- Description Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-precursor polypeptide
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr3 | 1 | CH_ath_164 | 3 | 4 | 0.00000108332 |
| Fragaria x ananassa | Fvb1-1 | 1 | CH_fan_388 | 3 | 7 | 0.000107468 |
| Fragaria vesca | Fvb1 | 1 | CH_fve_253 | 3 | 9 | 0.0000524162 |
| Manihot esculenta | Chromosome14 | 1 | CH_mes_450 | 3 | 15 | 0.000558294 |
| Papaver somniferum | NC_039362.1 | 1 | CH_pso_715 | 3 | 41 | 0.000970814 |
| Arabidopsis thaliana | Chr3 | 2 | CH_ath_164 | 3 | 4 | 0.00000108332 |
| Fragaria x ananassa | Fvb1-1 | 2 | CH_fan_388 | 3 | 7 | 0.000107468 |
| Fragaria vesca | Fvb1 | 2 | CH_fve_253 | 3 | 9 | 0.0000524162 |
| Manihot esculenta | Chromosome14 | 2 | CH_mes_450 | 3 | 15 | 0.000558294 |
| Papaver somniferum | NC_039362.1 | 2 | CH_pso_715 | 3 | 41 | 0.000970814 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |