Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin.transport.polar auxin transport.regulatory protein (BIG)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 1 CH_arhy_550 2 3 0.000269438
Brassica carinata ChrC05 1 CH_bca_525 2 2 0.0000213764
Brassica napus A05 1 CH_bna_463 2 2 0.0000556545
Camellia sinensis var. sinensis Chr2 1 CH_camsi_959 2 7 0.000962839
Cicer arietinum L. Ca_LG3_v3 1 CH_car_206 2 3 0.000233481
Ceratophyllum demersum 11 1 CH_cde_87 2 2 0.0000789796
Davidia involucrata GWHABJS00000014 1 CH_din_325 2 2 0.000150038
Erythranthe guttata scaffold_8 1 CH_egut_280 2 2 0.0000728147
Gossypium hirsutum A07 1 CH_ghi_180 3 3 0.0000000042779
Glycine max Gm08 1 CH_gma_369 2 2 0.000113867
Rhododendron simsii chr05 1 CH_rsi_524 2 3 0.000580745
Sapria himalayana scaffold39_5409082 1 CH_shi_144 2 3 0.000171536
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_314 2 2 0.000278772
Vanilla planifolia CM028159.1 1 CH_vpl_154 2 2 0.000073888
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 2 CH_arhy_550 2 3 0.000269438
Brassica carinata ChrC05 2 CH_bca_525 2 2 0.0000213764
Camellia sinensis var. sinensis Chr2 2 CH_camsi_959 2 7 0.000962839
Cicer arietinum L. Ca_LG3_v3 2 CH_car_206 2 3 0.000233481
Ceratophyllum demersum 11 2 CH_cde_87 2 2 0.0000789796
Davidia involucrata GWHABJS00000014 2 CH_din_325 2 2 0.000150038
Erythranthe guttata scaffold_8 2 CH_egut_280 2 2 0.0000728147
Gossypium hirsutum A07 2 CH_ghi_180 3 3 0.0000000042779
Glycine max Gm08 2 CH_gma_369 2 2 0.000113867
Rhododendron simsii chr05 2 CH_rsi_524 2 3 0.000580745
Sapria himalayana scaffold39_5409082 2 CH_shi_144 2 3 0.000171536
Vaccinium macrocarpon chr12_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_314 2 2 0.000278772
Vanilla planifolia CM028159.1 2 CH_vpl_154 2 2 0.000073888

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001