Functional clusters

Information

  • Type MapMan
  • Description Phytohormone action.auxin.conjugation and degradation.indole-3-acetic acid carboxyl methyltransferase (MES17)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cannabis sativa NC_044371.1 1 CH_cansat_340 2 2 0.000393985
Chenopodium quinoa C_Quinoa_Scaffold_1516 1 CH_cqu_160 3 4 0.000000134699
Chenopodium quinoa C_Quinoa_Scaffold_3631 1 CH_cqu_500 2 2 0.000473821
Helianthus annuus HanXRQChr07 1 CH_han_508 2 2 0.000115929
Oryza sativa ssp. japonica chr11 1 CH_osa_314 2 2 0.000316874
Oryza sativa ssp. japonica chr12 1 CH_osa_315 2 2 0.000316874
Rhododendron simsii chr03 1 CH_rsi_349 2 2 0.0000645307
Sequoiadendron giganteum chr5 1 CH_sgi_1114 2 2 0.000146145
Cannabis sativa NC_044371.1 2 CH_cansat_340 2 2 0.000393985
Chenopodium quinoa C_Quinoa_Scaffold_1516 2 CH_cqu_160 3 4 0.000000134699
Chenopodium quinoa C_Quinoa_Scaffold_3631 2 CH_cqu_500 2 2 0.000473821
Helianthus annuus HanXRQChr07 2 CH_han_508 2 2 0.000115929
Oryza sativa ssp. japonica chr11 2 CH_osa_314 2 2 0.000316874
Oryza sativa ssp. japonica chr12 2 CH_osa_315 2 2 0.000316874
Rhododendron simsii chr03 2 CH_rsi_349 2 2 0.0000645307
Sequoiadendron giganteum chr5 2 CH_sgi_1114 2 2 0.000146145

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001