Functional clusters
Information
- Type MapMan
- Description Phytohormone action.ethylene.perception and signal transduction.signal transducer (EIN3/EIL)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 1 | CH_arhy_189 | 4 | 8 | 0.0000000102498 |
| Capsicum annuum | PGAv.1.6.scaffold388 | 1 | CH_can_447 | 2 | 2 | 0.000826105 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2123 | 1 | CH_cqu_165 | 3 | 3 | 0.00000018859 |
| Erythranthe guttata | scaffold_8 | 1 | CH_egut_87 | 4 | 5 | 0.000000000405347 |
| Magnolia biondii | Chr04 | 1 | CH_mbi_242 | 3 | 8 | 0.00000396109 |
| Manihot esculenta | Chromosome13 | 1 | CH_mes_217 | 3 | 6 | 0.00000223662 |
| Nicotiana tabacum | Nitab4.5_0000271 | 1 | CH_nta_48 | 3 | 5 | 0.000000722306 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_1238 | 2 | 2 | 0.000292291 |
| Selaginella moellendorffii | scaffold_43 | 1 | CH_smo_81 | 3 | 16 | 0.0000731243 |
| Solanum tuberosum | ST4.03ch06 | 1 | CH_stu_216 | 3 | 3 | 0.000000472706 |
| Vanilla planifolia | CM028158.1 | 1 | CH_vpl_221 | 3 | 15 | 0.000130186 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 2 | CH_arhy_189 | 4 | 8 | 0.0000000102498 |
| Capsicum annuum | PGAv.1.6.scaffold388 | 2 | CH_can_447 | 2 | 2 | 0.000826105 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2123 | 2 | CH_cqu_165 | 3 | 3 | 0.00000018859 |
| Erythranthe guttata | scaffold_8 | 2 | CH_egut_87 | 4 | 5 | 0.000000000405347 |
| Magnolia biondii | Chr04 | 2 | CH_mbi_242 | 3 | 8 | 0.00000396109 |
| Manihot esculenta | Chromosome13 | 2 | CH_mes_217 | 3 | 6 | 0.00000223662 |
| Nicotiana tabacum | Nitab4.5_0000271 | 2 | CH_nta_48 | 3 | 5 | 0.000000722306 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_1238 | 2 | 2 | 0.000292291 |
| Selaginella moellendorffii | scaffold_43 | 2 | CH_smo_81 | 3 | 16 | 0.0000731243 |
| Solanum tuberosum | ST4.03ch06 | 2 | CH_stu_216 | 3 | 3 | 0.000000472706 |
| Vanilla planifolia | CM028158.1 | 2 | CH_vpl_221 | 3 | 15 | 0.000130186 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |