Functional clusters

Information

  • Type Gene Ontology
  • Description transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carya illinoinensis Chr09 3 CH_cil_436 7 9 0.000261331
Helianthus annuus HanXRQChr17 3 CH_han_317 14 35 0.00000106396
Quercus lobata 10 3 CH_qlo_284 16 29 0.000000000545735
Quercus lobata 5 3 CH_qlo_364 16 34 0.0000000142425
Quercus lobata 1 3 CH_qlo_483 18 53 0.000000407967
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_524 12 40 0.0000517727
Rhododendron simsii chr13 3 CH_rsi_254 8 9 0.00000159908
Salvia bowleyana GWHASIU00000005 3 CH_sbo_162 17 62 0.0000000250121
Carya illinoinensis Chr09 4 CH_cil_436 7 9 0.000261331
Helianthus annuus HanXRQChr17 4 CH_han_317 14 35 0.00000106396
Quercus lobata 10 4 CH_qlo_284 16 29 0.000000000545735
Quercus lobata 5 4 CH_qlo_364 16 34 0.0000000142425
Quercus lobata 1 4 CH_qlo_483 18 53 0.000000407967
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_524 12 40 0.0000517727
Rhododendron simsii chr13 4 CH_rsi_254 8 9 0.00000159908
Salvia bowleyana GWHASIU00000005 4 CH_sbo_162 17 62 0.0000000250121

Available child term results

Ontology identifier Description Number of clusters
GO:0000064 L-ornithine transmembrane transporter activity 2
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity 2
GO:0000295 adenine nucleotide transmembrane transporter activity 4
GO:0004129 cytochrome-c oxidase activity 16
GO:0004970 ionotropic glutamate receptor activity 4
GO:0005216 ion channel activity 60
GO:0005222 intracellular cAMP-activated cation channel activity 4
GO:0005223 intracellular cGMP-activated cation channel activity 4
GO:0005227 calcium activated cation channel activity 42
GO:0005230 extracellular ligand-gated ion channel activity 2
GO:0005245 voltage-gated calcium channel activity 40
GO:0005247 voltage-gated chloride channel activity 16
GO:0005249 voltage-gated potassium channel activity 16
GO:0005254 chloride channel activity 8
GO:0005262 calcium channel activity 4
GO:0005267 potassium channel activity 20
GO:0005272 sodium channel activity 32
GO:0005310 dicarboxylic acid transmembrane transporter activity 4
GO:0005315 inorganic phosphate transmembrane transporter activity 10
GO:0005319 lipid transporter activity 6
GO:0005338 nucleotide-sugar transmembrane transporter activity 2
GO:0005351 carbohydrate:proton symporter activity 16
GO:0005354 galactose transmembrane transporter activity 2
GO:0005355 glucose transmembrane transporter activity 2
GO:0005358 high-affinity glucose:proton symporter activity 4
GO:0005363 maltose transmembrane transporter activity 6
GO:0005364 maltose:proton symporter activity 2
GO:0005366 myo-inositol:proton symporter activity 2
GO:0005384 manganese ion transmembrane transporter activity 2
GO:0005385 zinc ion transmembrane transporter activity 8
GO:0005388 P-type calcium transporter activity 68
GO:0005432 calcium:sodium antiporter activity 34
GO:0005451 monovalent cation:proton antiporter activity 22
GO:0005452 inorganic anion exchanger activity 20
GO:0005457 GDP-fucose transmembrane transporter activity 6
GO:0005458 GDP-mannose transmembrane transporter activity 2
GO:0005460 UDP-glucose transmembrane transporter activity 4
GO:0005464 UDP-xylose transmembrane transporter activity 20
GO:0005548 phospholipid transporter activity 2
GO:0008121 ubiquinol-cytochrome-c reductase activity 40
GO:0008137 NADH dehydrogenase (ubiquinone) activity 24
GO:0008271 secondary active sulfate transmembrane transporter activity 64
GO:0008273 calcium, potassium:sodium antiporter activity 2
GO:0008308 voltage-gated anion channel activity 14
GO:0008324 cation transmembrane transporter activity 10
GO:0008381 mechanosensitive ion channel activity 10
GO:0008493 tetracycline transmembrane transporter activity 2
GO:0008506 sucrose:proton symporter activity 2
GO:0008509 anion transmembrane transporter activity 4
GO:0008511 sodium:potassium:chloride symporter activity 4
GO:0008514 organic anion transmembrane transporter activity 12
GO:0008515 sucrose transmembrane transporter activity 16
GO:0008519 ammonium transmembrane transporter activity 2
GO:0008521 acetyl-CoA transmembrane transporter activity 2
GO:0008526 phosphatidylinositol transfer activity 10
GO:0008551 P-type cadmium transporter activity 2
GO:0008553 P-type proton-exporting transporter activity 10
GO:0008559 ABC-type xenobiotic transporter activity 20
GO:0009671 nitrate:proton symporter activity 4
GO:0009673 low-affinity phosphate transmembrane transporter activity 4
GO:0009674 potassium:sodium symporter activity 14
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 20
GO:0010174 nucleoside transmembrane transporter activity, against a concentration gradient 12
GO:0010292 GTP:GDP antiporter activity 2
GO:0010329 auxin efflux transmembrane transporter activity 2
GO:0010348 lithium:proton antiporter activity 8
GO:0010486 manganese:proton antiporter activity 10
GO:0010542 nitrate efflux transmembrane transporter activity 8
GO:0015075 ion transmembrane transporter activity 8
GO:0015078 proton transmembrane transporter activity 4
GO:0015079 potassium ion transmembrane transporter activity 114
GO:0015081 sodium ion transmembrane transporter activity 8
GO:0015083 aluminum ion transmembrane transporter activity 14
GO:0015086 cadmium ion transmembrane transporter activity 2
GO:0015087 cobalt ion transmembrane transporter activity 8
GO:0015089 high-affinity copper ion transmembrane transporter activity 6
GO:0015095 magnesium ion transmembrane transporter activity 2
GO:0015098 molybdate ion transmembrane transporter activity 2
GO:0015105 arsenite transmembrane transporter activity 2
GO:0015108 chloride transmembrane transporter activity 6
GO:0015112 nitrate transmembrane transporter activity 44
GO:0015113 nitrite transmembrane transporter activity 2
GO:0015115 silicate transmembrane transporter activity 12
GO:0015121 phosphoenolpyruvate:phosphate antiporter activity 2
GO:0015129 lactate transmembrane transporter activity 8
GO:0015137 citrate transmembrane transporter activity 30
GO:0015139 alpha-ketoglutarate transmembrane transporter activity 4
GO:0015140 malate transmembrane transporter activity 2
GO:0015145 monosaccharide transmembrane transporter activity 132
GO:0015148 D-xylose transmembrane transporter activity 24
GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity 8
GO:0015168 glycerol transmembrane transporter activity 2
GO:0015171 amino acid transmembrane transporter activity 4
GO:0015172 acidic amino acid transmembrane transporter activity 8
GO:0015173 aromatic amino acid transmembrane transporter activity 10
GO:0015174 basic amino acid transmembrane transporter activity 2
GO:0015183 L-aspartate transmembrane transporter activity 10
GO:0015185 gamma-aminobutyric acid transmembrane transporter activity 46
GO:0015186 L-glutamine transmembrane transporter activity 10
GO:0015194 L-serine transmembrane transporter activity 4
GO:0015200 methylammonium transmembrane transporter activity 2
GO:0015203 polyamine transmembrane transporter activity 36
GO:0015205 nucleobase transmembrane transporter activity 4
GO:0015211 purine nucleoside transmembrane transporter activity 194
GO:0015216 purine nucleotide transmembrane transporter activity 2
GO:0015220 choline transmembrane transporter activity 6
GO:0015225 biotin transmembrane transporter activity 12
GO:0015226 carnitine transmembrane transporter activity 42
GO:0015233 pantothenate transmembrane transporter activity 10
GO:0015247 aminophospholipid flippase activity 2
GO:0015250 water channel activity 2
GO:0015267 channel activity 76
GO:0015269 calcium-activated potassium channel activity 30
GO:0015271 outward rectifier potassium channel activity 4
GO:0015276 ligand-gated ion channel activity 324
GO:0015284 fructose uniporter activity 6
GO:0015288 porin activity 2
GO:0015291 secondary active transmembrane transporter activity 2
GO:0015292 uniporter activity 8
GO:0015293 symporter activity 8
GO:0015299 solute:proton antiporter activity 170
GO:0015301 anion:anion antiporter activity 2
GO:0015318 inorganic molecular entity transmembrane transporter activity 2
GO:0015334 high-affinity oligopeptide transmembrane transporter activity 2
GO:0015368 calcium:cation antiporter activity 10
GO:0015369 calcium:proton antiporter activity 18
GO:0015377 cation:chloride symporter activity 22
GO:0015385 sodium:proton antiporter activity 4
GO:0015386 potassium:proton antiporter activity 10
GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity 6
GO:0015415 ATPase-coupled phosphate ion transmembrane transporter activity 14
GO:0015431 ABC-type glutathione S-conjugate transporter activity 18
GO:0015444 P-type magnesium transporter activity 4
GO:0015462 ABC-type protein transporter activity 4
GO:0015505 uracil:cation symporter activity 22
GO:0015562 efflux transmembrane transporter activity 2
GO:0015932 nucleobase-containing compound transmembrane transporter activity 4
GO:0017077 oxidative phosphorylation uncoupler activity 6
GO:0019829 ATPase-coupled cation transmembrane transporter activity 22
GO:0022803 passive transmembrane transporter activity 2
GO:0022821 potassium ion antiporter activity 20
GO:0022843 voltage-gated cation channel activity 2
GO:0022853 active ion transmembrane transporter activity 10
GO:0022857 transmembrane transporter activity 112
GO:0022883 zinc efflux transmembrane transporter activity 8
GO:0022890 inorganic cation transmembrane transporter activity 2
GO:0030171 voltage-gated proton channel activity 2
GO:0034639 L-amino acid efflux transmembrane transporter activity 4
GO:0035673 oligopeptide transmembrane transporter activity 176
GO:0042626 ATPase-coupled transmembrane transporter activity 30
GO:0042900 arabinose transmembrane transporter activity 4
GO:0042907 xanthine transmembrane transporter activity 2
GO:0042910 xenobiotic transmembrane transporter activity 282
GO:0042937 tripeptide transmembrane transporter activity 76
GO:0043879 glycolate transmembrane transporter activity 8
GO:0044604 ABC-type phytochelatin transporter activity 14
GO:0046873 metal ion transmembrane transporter activity 12
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2
GO:0046943 carboxylic acid transmembrane transporter activity 6
GO:0046961 proton-transporting ATPase activity, rotational mechanism 6
GO:0050833 pyruvate transmembrane transporter activity 2
GO:0051119 sugar transmembrane transporter activity 76
GO:0051724 NAD transmembrane transporter activity 4
GO:0051980 iron-nicotianamine transmembrane transporter activity 14
GO:0055055 D-glucose:proton symporter activity 22
GO:0071916 dipeptide transmembrane transporter activity 2
GO:0080054 low-affinity nitrate transmembrane transporter activity 40
GO:0080122 AMP transmembrane transporter activity 2
GO:0080139 borate efflux transmembrane transporter activity 10
GO:0090417 N-methylnicotinate transmembrane transporter activity 4
GO:0090440 abscisic acid transmembrane transporter activity 4
GO:0090448 glucosinolate:proton symporter activity 6
GO:0090482 vitamin transmembrane transporter activity 2
GO:0099604 ligand-gated calcium channel activity 10
GO:0140326 ATPase-coupled intramembrane lipid transporter activity 10
GO:0140359 ABC-type transporter activity 436
GO:1901505 carbohydrate derivative transmembrane transporter activity 2
GO:1901683 arsenate ion transmembrane transporter activity 18
GO:1901974 glycerate transmembrane transporter activity 6
GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity 2
GO:1903425 fluoride transmembrane transporter activity 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001