Functional clusters
Information
- Type Gene Ontology
- Description solute:proton antiporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr8 | 3 | CH_acertr_132 | 4 | 4 | 0.0000000775932 |
Acer truncatum | chr1 | 3 | CH_acertr_160 | 4 | 5 | 0.00000038758 |
Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_225 | 3 | 3 | 0.000105967 |
Arabidopsis lyrata | scaffold_1 | 3 | CH_aly_294 | 3 | 4 | 0.00042339 |
Aquilegia oxysepala | CHR01 | 3 | CH_aox_166 | 3 | 3 | 0.0000631473 |
Aquilegia oxysepala | CHR01 | 3 | CH_aox_245 | 3 | 4 | 0.000252336 |
Amborella trichopoda | AmTr_v1.0_scaffold00068 | 3 | CH_atr_104 | 5 | 15 | 0.000000247169 |
Brassica napus | A07 | 3 | CH_bna_122 | 6 | 14 | 0.00000000202484 |
Camellia sinensis var. sinensis | Chr14 | 3 | CH_camsi_241 | 4 | 4 | 0.0000000783127 |
Cannabis sativa | NC_044375.1 | 3 | CH_cansat_192 | 4 | 13 | 0.0000444611 |
Cannabis sativa | NC_044378.1 | 3 | CH_cansat_286 | 3 | 4 | 0.000218057 |
Cicer arietinum L. | Ca_LG4_v3 | 3 | CH_car_128 | 3 | 3 | 0.000128939 |
Corylus avellana | 6 | 3 | CH_cav_156 | 5 | 21 | 0.00000298273 |
Corylus avellana | 9 | 3 | CH_cav_270 | 3 | 3 | 0.0000805845 |
Coffea canephora | chr2 | 3 | CH_ccan_211 | 3 | 11 | 0.0000443319 |
Citrus clementina | scaffold_7 | 3 | CH_ccl_366 | 3 | 3 | 0.000250373 |
Citrus clementina | scaffold_6 | 3 | CH_ccl_432 | 3 | 4 | 0.00099988 |
Citrus clementina | scaffold_4 | 3 | CH_ccl_81 | 6 | 7 | 0.0000000000150896 |
Ceratophyllum demersum | 5 | 3 | CH_cde_34 | 5 | 10 | 0.000000036714 |
Cardamine hirsuta | Chr1 | 3 | CH_chi_126 | 4 | 4 | 0.000000228181 |
Carya illinoinensis | Chr14 | 3 | CH_cil_242 | 4 | 5 | 0.00000131033 |
Carya illinoinensis | Chr13 | 3 | CH_cil_357 | 4 | 11 | 0.0000857991 |
Carya illinoinensis | Chr05 | 3 | CH_cil_382 | 3 | 3 | 0.00015975 |
Cucumis melo | chr07 | 3 | CH_cme_163 | 3 | 3 | 0.0000659568 |
Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 3 | CH_cqu_399 | 3 | 3 | 0.000161329 |
Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 3 | CH_cqu_505 | 5 | 48 | 0.000592547 |
Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 3 | CH_cqu_510 | 3 | 4 | 0.000644566 |
Capsella rubella | scaffold_5 | 3 | CH_cru_236 | 3 | 3 | 0.000106205 |
Capsella rubella | scaffold_1 | 3 | CH_cru_237 | 3 | 3 | 0.000106205 |
Cucumis sativus L. | chr4 | 3 | CH_csa_100 | 4 | 4 | 0.000000128826 |
Daucus carota | DCARv2_Chr9 | 3 | CH_dca_273 | 3 | 3 | 0.000134844 |
Davidia involucrata | GWHABJS00000009 | 3 | CH_din_257 | 3 | 3 | 0.0000878936 |
Eucalyptus grandis | Chr07 | 3 | CH_egr_561 | 4 | 8 | 0.00000309775 |
Erythranthe guttata | scaffold_14 | 3 | CH_egut_96 | 6 | 14 | 0.000000000378798 |
Eutrema salsugineum | scaffold_4 | 3 | CH_esa_170 | 3 | 3 | 0.000141047 |
Fragaria vesca | Fvb7 | 3 | CH_fve_120 | 6 | 25 | 0.0000000387166 |
Gossypium hirsutum | A08 | 3 | CH_ghi_129 | 6 | 9 | 0.0000000000982147 |
Gossypium hirsutum | D08 | 3 | CH_ghi_130 | 6 | 9 | 0.0000000000982147 |
Gossypium hirsutum | A02 | 3 | CH_ghi_546 | 3 | 3 | 0.000307987 |
Gossypium hirsutum | D12 | 3 | CH_ghi_547 | 3 | 3 | 0.000307987 |
Glycine max | Gm14 | 3 | CH_gma_357 | 3 | 3 | 0.000205908 |
Gossypium raimondii | Chr08 | 3 | CH_gra_273 | 3 | 3 | 0.000171205 |
Gossypium raimondii | Chr04 | 3 | CH_gra_66 | 6 | 8 | 0.0000000000189109 |
Helianthus annuus | HanXRQChr14 | 3 | CH_han_543 | 3 | 4 | 0.00012706 |
Hydrangea macrophylla | Hma1.2p1_0292F.1 | 3 | CH_hma_105 | 3 | 3 | 0.00000673812 |
Lupinus albus | Lalb_Chr20 | 3 | CH_lal_314 | 3 | 3 | 0.000236148 |
Lupinus albus | Lalb_Chr18 | 3 | CH_lal_315 | 3 | 3 | 0.000236148 |
Lupinus albus | Lalb_Chr20 | 3 | CH_lal_415 | 3 | 4 | 0.000943304 |
Lotus japonicus | chr6 | 3 | CH_lja_132 | 5 | 13 | 0.00000104363 |
Magnolia biondii | Chr15 | 3 | CH_mbi_87 | 8 | 70 | 0.0000000000332141 |
Malus domestica | Chr16 | 3 | CH_mdo_517 | 3 | 3 | 0.000170578 |
Malus domestica | Chr07 | 3 | CH_mdo_519 | 4 | 13 | 0.000173936 |
Medicago truncatula | chr5 | 3 | CH_mtr_504 | 5 | 33 | 0.0000475309 |
Medicago truncatula | chr7 | 3 | CH_mtr_507 | 4 | 11 | 0.0000522448 |
Nelumbo nucifera | chr2 | 3 | CH_nnu_299 | 3 | 6 | 0.000563419 |
Punica granatum | NC_045134.1 | 3 | CH_pgr_247 | 3 | 3 | 0.0000712491 |
Prunus persica | Pp06 | 3 | CH_ppe_131 | 5 | 5 | 0.000000000545658 |
Prunus persica | Pp02 | 3 | CH_ppe_207 | 4 | 4 | 0.000000311234 |
Pisum sativum | chr5LG3 | 3 | CH_psa_251 | 3 | 3 | 0.000101241 |
Papaver somniferum | NW_020620492.1 | 3 | CH_pso_115 | 9 | 69 | 0.0000000000126661 |
Papaver somniferum | NC_039362.1 | 3 | CH_pso_140 | 7 | 28 | 0.000000000236815 |
Papaver somniferum | NC_039358.1 | 3 | CH_pso_400 | 4 | 9 | 0.0000190256 |
Papaver somniferum | NW_020620714.1 | 3 | CH_pso_636 | 3 | 4 | 0.000538133 |
Phaseolus vulgaris | Chr06 | 3 | CH_pvu_212 | 4 | 9 | 0.0000342921 |
Quercus lobata | 1 | 3 | CH_qlo_574 | 5 | 19 | 0.00000394057 |
Quercus lobata | 7 | 3 | CH_qlo_805 | 3 | 3 | 0.00015122 |
Rosa chinensis | RcHm_v2.0_Chr1 | 3 | CH_rch_482 | 3 | 3 | 0.000038655 |
Simmondsia chinensis | GWHAASQ00000025 | 3 | CH_sci_184 | 5 | 38 | 0.000160966 |
Sechium edule | LG06 | 3 | CH_sed_189 | 3 | 3 | 0.000101115 |
Sequoiadendron giganteum | chr9 | 3 | CH_sgi_500 | 4 | 4 | 0.00000000950549 |
Sequoiadendron giganteum | chr7 | 3 | CH_sgi_870 | 3 | 3 | 0.0000144529 |
Sapria himalayana | scaffold26_7557582 | 3 | CH_shi_125 | 4 | 18 | 0.0000181149 |
Sapria himalayana | scaffold6_19132642 | 3 | CH_shi_134 | 3 | 4 | 0.0000396882 |
Schrenkiella parvula | ch6-6 | 3 | CH_spa_139 | 3 | 3 | 0.000150782 |
Trochodendron aralioides | group16 | 3 | CH_tar_300 | 3 | 3 | 0.0000935153 |
Trochodendron aralioides | group7 | 3 | CH_tar_502 | 3 | 5 | 0.000933203 |
Theobroma cacao | Chromosome_5 | 3 | CH_tca_290 | 3 | 3 | 0.0000923696 |
Tarenaya hassleriana | NW_010969548.1 | 3 | CH_tha_114 | 3 | 3 | 0.00011109 |
Tarenaya hassleriana | NW_010967707.1 | 3 | CH_tha_115 | 3 | 3 | 0.00011109 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_467 | 3 | CH_tpr_246 | 3 | 3 | 0.000130479 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_267 | 3 | 3 | 0.000171548 |
Vanilla planifolia | CM028155.1 | 3 | CH_vpl_180 | 3 | 3 | 0.0000584727 |
Vanilla planifolia | JADCNL010000016.1 | 3 | CH_vpl_181 | 3 | 3 | 0.0000584727 |
Vitis vinifera | chr6 | 3 | CH_vvi_221 | 4 | 9 | 0.0000122145 |
Vitis vinifera | chr2 | 3 | CH_vvi_91 | 5 | 5 | 0.00000000012604 |
Acer truncatum | chr8 | 4 | CH_acertr_132 | 4 | 4 | 0.0000000775932 |
Acer truncatum | chr1 | 4 | CH_acertr_160 | 4 | 5 | 0.00000038758 |
Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_225 | 3 | 3 | 0.000105967 |
Arabidopsis lyrata | scaffold_1 | 4 | CH_aly_294 | 3 | 4 | 0.00042339 |
Aquilegia oxysepala | CHR01 | 4 | CH_aox_166 | 3 | 3 | 0.0000631473 |
Aquilegia oxysepala | CHR01 | 4 | CH_aox_245 | 3 | 4 | 0.000252336 |
Amborella trichopoda | AmTr_v1.0_scaffold00068 | 4 | CH_atr_104 | 5 | 15 | 0.000000247169 |
Brassica napus | A07 | 4 | CH_bna_122 | 6 | 14 | 0.00000000202484 |
Camellia sinensis var. sinensis | Chr14 | 4 | CH_camsi_241 | 4 | 4 | 0.0000000783127 |
Cannabis sativa | NC_044375.1 | 4 | CH_cansat_192 | 4 | 13 | 0.0000444611 |
Cannabis sativa | NC_044378.1 | 4 | CH_cansat_286 | 3 | 4 | 0.000218057 |
Cicer arietinum L. | Ca_LG4_v3 | 4 | CH_car_128 | 3 | 3 | 0.000128939 |
Corylus avellana | 6 | 4 | CH_cav_156 | 5 | 21 | 0.00000298273 |
Corylus avellana | 9 | 4 | CH_cav_270 | 3 | 3 | 0.0000805845 |
Coffea canephora | chr2 | 4 | CH_ccan_211 | 3 | 11 | 0.0000443319 |
Citrus clementina | scaffold_7 | 4 | CH_ccl_366 | 3 | 3 | 0.000250373 |
Citrus clementina | scaffold_6 | 4 | CH_ccl_432 | 3 | 4 | 0.00099988 |
Citrus clementina | scaffold_4 | 4 | CH_ccl_81 | 6 | 7 | 0.0000000000150896 |
Ceratophyllum demersum | 5 | 4 | CH_cde_34 | 5 | 10 | 0.000000036714 |
Cardamine hirsuta | Chr1 | 4 | CH_chi_126 | 4 | 4 | 0.000000228181 |
Carya illinoinensis | Chr14 | 4 | CH_cil_242 | 4 | 5 | 0.00000131033 |
Carya illinoinensis | Chr13 | 4 | CH_cil_357 | 4 | 11 | 0.0000857991 |
Carya illinoinensis | Chr05 | 4 | CH_cil_382 | 3 | 3 | 0.00015975 |
Cucumis melo | chr07 | 4 | CH_cme_163 | 3 | 3 | 0.0000659568 |
Chenopodium quinoa | C_Quinoa_Scaffold_2716 | 4 | CH_cqu_399 | 3 | 3 | 0.000161329 |
Chenopodium quinoa | C_Quinoa_Scaffold_2493 | 4 | CH_cqu_505 | 5 | 48 | 0.000592547 |
Chenopodium quinoa | C_Quinoa_Scaffold_1280 | 4 | CH_cqu_510 | 3 | 4 | 0.000644566 |
Capsella rubella | scaffold_5 | 4 | CH_cru_236 | 3 | 3 | 0.000106205 |
Capsella rubella | scaffold_1 | 4 | CH_cru_237 | 3 | 3 | 0.000106205 |
Cucumis sativus L. | chr4 | 4 | CH_csa_100 | 4 | 4 | 0.000000128826 |
Daucus carota | DCARv2_Chr9 | 4 | CH_dca_273 | 3 | 3 | 0.000134844 |
Davidia involucrata | GWHABJS00000009 | 4 | CH_din_257 | 3 | 3 | 0.0000878936 |
Eucalyptus grandis | Chr07 | 4 | CH_egr_561 | 4 | 8 | 0.00000309775 |
Erythranthe guttata | scaffold_14 | 4 | CH_egut_96 | 6 | 14 | 0.000000000378798 |
Eutrema salsugineum | scaffold_4 | 4 | CH_esa_170 | 3 | 3 | 0.000141047 |
Fragaria vesca | Fvb7 | 4 | CH_fve_120 | 6 | 25 | 0.0000000387166 |
Gossypium hirsutum | A08 | 4 | CH_ghi_129 | 6 | 9 | 0.0000000000982147 |
Gossypium hirsutum | D08 | 4 | CH_ghi_130 | 6 | 9 | 0.0000000000982147 |
Gossypium hirsutum | A02 | 4 | CH_ghi_546 | 3 | 3 | 0.000307987 |
Gossypium hirsutum | D12 | 4 | CH_ghi_547 | 3 | 3 | 0.000307987 |
Glycine max | Gm14 | 4 | CH_gma_357 | 3 | 3 | 0.000205908 |
Gossypium raimondii | Chr08 | 4 | CH_gra_273 | 3 | 3 | 0.000171205 |
Gossypium raimondii | Chr04 | 4 | CH_gra_66 | 6 | 8 | 0.0000000000189109 |
Helianthus annuus | HanXRQChr14 | 4 | CH_han_543 | 3 | 4 | 0.00012706 |
Hydrangea macrophylla | Hma1.2p1_0292F.1 | 4 | CH_hma_105 | 3 | 3 | 0.00000673812 |
Lupinus albus | Lalb_Chr20 | 4 | CH_lal_314 | 3 | 3 | 0.000236148 |
Lupinus albus | Lalb_Chr18 | 4 | CH_lal_315 | 3 | 3 | 0.000236148 |
Lupinus albus | Lalb_Chr20 | 4 | CH_lal_415 | 3 | 4 | 0.000943304 |
Lotus japonicus | chr6 | 4 | CH_lja_132 | 5 | 13 | 0.00000104363 |
Magnolia biondii | Chr15 | 4 | CH_mbi_87 | 8 | 70 | 0.0000000000332141 |
Malus domestica | Chr16 | 4 | CH_mdo_517 | 3 | 3 | 0.000170578 |
Malus domestica | Chr07 | 4 | CH_mdo_519 | 4 | 13 | 0.000173936 |
Medicago truncatula | chr5 | 4 | CH_mtr_504 | 5 | 33 | 0.0000475309 |
Medicago truncatula | chr7 | 4 | CH_mtr_507 | 4 | 11 | 0.0000522448 |
Nelumbo nucifera | chr2 | 4 | CH_nnu_299 | 3 | 6 | 0.000563419 |
Punica granatum | NC_045134.1 | 4 | CH_pgr_247 | 3 | 3 | 0.0000712491 |
Prunus persica | Pp06 | 4 | CH_ppe_131 | 5 | 5 | 0.000000000545658 |
Prunus persica | Pp02 | 4 | CH_ppe_207 | 4 | 4 | 0.000000311234 |
Pisum sativum | chr5LG3 | 4 | CH_psa_251 | 3 | 3 | 0.000101241 |
Papaver somniferum | NW_020620492.1 | 4 | CH_pso_115 | 9 | 69 | 0.0000000000126661 |
Papaver somniferum | NC_039362.1 | 4 | CH_pso_140 | 7 | 28 | 0.000000000236815 |
Papaver somniferum | NC_039358.1 | 4 | CH_pso_400 | 4 | 9 | 0.0000190256 |
Papaver somniferum | NW_020620714.1 | 4 | CH_pso_636 | 3 | 4 | 0.000538133 |
Phaseolus vulgaris | Chr06 | 4 | CH_pvu_212 | 4 | 9 | 0.0000342921 |
Quercus lobata | 1 | 4 | CH_qlo_574 | 5 | 19 | 0.00000394057 |
Quercus lobata | 7 | 4 | CH_qlo_805 | 3 | 3 | 0.00015122 |
Rosa chinensis | RcHm_v2.0_Chr1 | 4 | CH_rch_482 | 3 | 3 | 0.000038655 |
Simmondsia chinensis | GWHAASQ00000025 | 4 | CH_sci_184 | 5 | 38 | 0.000160966 |
Sechium edule | LG06 | 4 | CH_sed_189 | 3 | 3 | 0.000101115 |
Sequoiadendron giganteum | chr9 | 4 | CH_sgi_500 | 4 | 4 | 0.00000000950549 |
Sequoiadendron giganteum | chr7 | 4 | CH_sgi_870 | 3 | 3 | 0.0000144529 |
Sapria himalayana | scaffold26_7557582 | 4 | CH_shi_125 | 4 | 18 | 0.0000181149 |
Sapria himalayana | scaffold6_19132642 | 4 | CH_shi_134 | 3 | 4 | 0.0000396882 |
Schrenkiella parvula | ch6-6 | 4 | CH_spa_139 | 3 | 3 | 0.000150782 |
Trochodendron aralioides | group16 | 4 | CH_tar_300 | 3 | 3 | 0.0000935153 |
Trochodendron aralioides | group7 | 4 | CH_tar_502 | 3 | 5 | 0.000933203 |
Theobroma cacao | Chromosome_5 | 4 | CH_tca_290 | 3 | 3 | 0.0000923696 |
Tarenaya hassleriana | NW_010969548.1 | 4 | CH_tha_114 | 3 | 3 | 0.00011109 |
Tarenaya hassleriana | NW_010967707.1 | 4 | CH_tha_115 | 3 | 3 | 0.00011109 |
Trifolium pratense | Tp57577_TGAC_v2_scaf_467 | 4 | CH_tpr_246 | 3 | 3 | 0.000130479 |
Vaccinium macrocarpon | chr4_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_267 | 3 | 3 | 0.000171548 |
Vanilla planifolia | CM028155.1 | 4 | CH_vpl_180 | 3 | 3 | 0.0000584727 |
Vanilla planifolia | JADCNL010000016.1 | 4 | CH_vpl_181 | 3 | 3 | 0.0000584727 |
Vitis vinifera | chr6 | 4 | CH_vvi_221 | 4 | 9 | 0.0000122145 |
Vitis vinifera | chr2 | 4 | CH_vvi_91 | 5 | 5 | 0.00000000012604 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0005451 | monovalent cation:proton antiporter activity | 22 |
GO:0010348 | lithium:proton antiporter activity | 8 |
GO:0015369 | calcium:proton antiporter activity | 18 |
GO:0015385 | sodium:proton antiporter activity | 4 |
GO:0015386 | potassium:proton antiporter activity | 10 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |