Functional clusters

Information

  • Type Gene Ontology
  • Description solute:proton antiporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr8 3 CH_acertr_132 4 4 0.0000000775932
Acer truncatum chr1 3 CH_acertr_160 4 5 0.00000038758
Arabidopsis lyrata scaffold_5 3 CH_aly_225 3 3 0.000105967
Arabidopsis lyrata scaffold_1 3 CH_aly_294 3 4 0.00042339
Aquilegia oxysepala CHR01 3 CH_aox_166 3 3 0.0000631473
Aquilegia oxysepala CHR01 3 CH_aox_245 3 4 0.000252336
Amborella trichopoda AmTr_v1.0_scaffold00068 3 CH_atr_104 5 15 0.000000247169
Brassica napus A07 3 CH_bna_122 6 14 0.00000000202484
Camellia sinensis var. sinensis Chr14 3 CH_camsi_241 4 4 0.0000000783127
Cannabis sativa NC_044375.1 3 CH_cansat_192 4 13 0.0000444611
Cannabis sativa NC_044378.1 3 CH_cansat_286 3 4 0.000218057
Cicer arietinum L. Ca_LG4_v3 3 CH_car_128 3 3 0.000128939
Corylus avellana 6 3 CH_cav_156 5 21 0.00000298273
Corylus avellana 9 3 CH_cav_270 3 3 0.0000805845
Coffea canephora chr2 3 CH_ccan_211 3 11 0.0000443319
Citrus clementina scaffold_7 3 CH_ccl_366 3 3 0.000250373
Citrus clementina scaffold_6 3 CH_ccl_432 3 4 0.00099988
Citrus clementina scaffold_4 3 CH_ccl_81 6 7 0.0000000000150896
Ceratophyllum demersum 5 3 CH_cde_34 5 10 0.000000036714
Cardamine hirsuta Chr1 3 CH_chi_126 4 4 0.000000228181
Carya illinoinensis Chr14 3 CH_cil_242 4 5 0.00000131033
Carya illinoinensis Chr13 3 CH_cil_357 4 11 0.0000857991
Carya illinoinensis Chr05 3 CH_cil_382 3 3 0.00015975
Cucumis melo chr07 3 CH_cme_163 3 3 0.0000659568
Chenopodium quinoa C_Quinoa_Scaffold_2716 3 CH_cqu_399 3 3 0.000161329
Chenopodium quinoa C_Quinoa_Scaffold_2493 3 CH_cqu_505 5 48 0.000592547
Chenopodium quinoa C_Quinoa_Scaffold_1280 3 CH_cqu_510 3 4 0.000644566
Capsella rubella scaffold_5 3 CH_cru_236 3 3 0.000106205
Capsella rubella scaffold_1 3 CH_cru_237 3 3 0.000106205
Cucumis sativus L. chr4 3 CH_csa_100 4 4 0.000000128826
Daucus carota DCARv2_Chr9 3 CH_dca_273 3 3 0.000134844
Davidia involucrata GWHABJS00000009 3 CH_din_257 3 3 0.0000878936
Eucalyptus grandis Chr07 3 CH_egr_561 4 8 0.00000309775
Erythranthe guttata scaffold_14 3 CH_egut_96 6 14 0.000000000378798
Eutrema salsugineum scaffold_4 3 CH_esa_170 3 3 0.000141047
Fragaria vesca Fvb7 3 CH_fve_120 6 25 0.0000000387166
Gossypium hirsutum A08 3 CH_ghi_129 6 9 0.0000000000982147
Gossypium hirsutum D08 3 CH_ghi_130 6 9 0.0000000000982147
Gossypium hirsutum A02 3 CH_ghi_546 3 3 0.000307987
Gossypium hirsutum D12 3 CH_ghi_547 3 3 0.000307987
Glycine max Gm14 3 CH_gma_357 3 3 0.000205908
Gossypium raimondii Chr08 3 CH_gra_273 3 3 0.000171205
Gossypium raimondii Chr04 3 CH_gra_66 6 8 0.0000000000189109
Helianthus annuus HanXRQChr14 3 CH_han_543 3 4 0.00012706
Hydrangea macrophylla Hma1.2p1_0292F.1 3 CH_hma_105 3 3 0.00000673812
Lupinus albus Lalb_Chr20 3 CH_lal_314 3 3 0.000236148
Lupinus albus Lalb_Chr18 3 CH_lal_315 3 3 0.000236148
Lupinus albus Lalb_Chr20 3 CH_lal_415 3 4 0.000943304
Lotus japonicus chr6 3 CH_lja_132 5 13 0.00000104363
Magnolia biondii Chr15 3 CH_mbi_87 8 70 0.0000000000332141
Malus domestica Chr16 3 CH_mdo_517 3 3 0.000170578
Malus domestica Chr07 3 CH_mdo_519 4 13 0.000173936
Medicago truncatula chr5 3 CH_mtr_504 5 33 0.0000475309
Medicago truncatula chr7 3 CH_mtr_507 4 11 0.0000522448
Nelumbo nucifera chr2 3 CH_nnu_299 3 6 0.000563419
Punica granatum NC_045134.1 3 CH_pgr_247 3 3 0.0000712491
Prunus persica Pp06 3 CH_ppe_131 5 5 0.000000000545658
Prunus persica Pp02 3 CH_ppe_207 4 4 0.000000311234
Pisum sativum chr5LG3 3 CH_psa_251 3 3 0.000101241
Papaver somniferum NW_020620492.1 3 CH_pso_115 9 69 0.0000000000126661
Papaver somniferum NC_039362.1 3 CH_pso_140 7 28 0.000000000236815
Papaver somniferum NC_039358.1 3 CH_pso_400 4 9 0.0000190256
Papaver somniferum NW_020620714.1 3 CH_pso_636 3 4 0.000538133
Phaseolus vulgaris Chr06 3 CH_pvu_212 4 9 0.0000342921
Quercus lobata 1 3 CH_qlo_574 5 19 0.00000394057
Quercus lobata 7 3 CH_qlo_805 3 3 0.00015122
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_482 3 3 0.000038655
Simmondsia chinensis GWHAASQ00000025 3 CH_sci_184 5 38 0.000160966
Sechium edule LG06 3 CH_sed_189 3 3 0.000101115
Sequoiadendron giganteum chr9 3 CH_sgi_500 4 4 0.00000000950549
Sequoiadendron giganteum chr7 3 CH_sgi_870 3 3 0.0000144529
Sapria himalayana scaffold26_7557582 3 CH_shi_125 4 18 0.0000181149
Sapria himalayana scaffold6_19132642 3 CH_shi_134 3 4 0.0000396882
Schrenkiella parvula ch6-6 3 CH_spa_139 3 3 0.000150782
Trochodendron aralioides group16 3 CH_tar_300 3 3 0.0000935153
Trochodendron aralioides group7 3 CH_tar_502 3 5 0.000933203
Theobroma cacao Chromosome_5 3 CH_tca_290 3 3 0.0000923696
Tarenaya hassleriana NW_010969548.1 3 CH_tha_114 3 3 0.00011109
Tarenaya hassleriana NW_010967707.1 3 CH_tha_115 3 3 0.00011109
Trifolium pratense Tp57577_TGAC_v2_scaf_467 3 CH_tpr_246 3 3 0.000130479
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_267 3 3 0.000171548
Vanilla planifolia CM028155.1 3 CH_vpl_180 3 3 0.0000584727
Vanilla planifolia JADCNL010000016.1 3 CH_vpl_181 3 3 0.0000584727
Vitis vinifera chr6 3 CH_vvi_221 4 9 0.0000122145
Vitis vinifera chr2 3 CH_vvi_91 5 5 0.00000000012604
Acer truncatum chr8 4 CH_acertr_132 4 4 0.0000000775932
Acer truncatum chr1 4 CH_acertr_160 4 5 0.00000038758
Arabidopsis lyrata scaffold_5 4 CH_aly_225 3 3 0.000105967
Arabidopsis lyrata scaffold_1 4 CH_aly_294 3 4 0.00042339
Aquilegia oxysepala CHR01 4 CH_aox_166 3 3 0.0000631473
Aquilegia oxysepala CHR01 4 CH_aox_245 3 4 0.000252336
Amborella trichopoda AmTr_v1.0_scaffold00068 4 CH_atr_104 5 15 0.000000247169
Brassica napus A07 4 CH_bna_122 6 14 0.00000000202484
Camellia sinensis var. sinensis Chr14 4 CH_camsi_241 4 4 0.0000000783127
Cannabis sativa NC_044375.1 4 CH_cansat_192 4 13 0.0000444611
Cannabis sativa NC_044378.1 4 CH_cansat_286 3 4 0.000218057
Cicer arietinum L. Ca_LG4_v3 4 CH_car_128 3 3 0.000128939
Corylus avellana 6 4 CH_cav_156 5 21 0.00000298273
Corylus avellana 9 4 CH_cav_270 3 3 0.0000805845
Coffea canephora chr2 4 CH_ccan_211 3 11 0.0000443319
Citrus clementina scaffold_7 4 CH_ccl_366 3 3 0.000250373
Citrus clementina scaffold_6 4 CH_ccl_432 3 4 0.00099988
Citrus clementina scaffold_4 4 CH_ccl_81 6 7 0.0000000000150896
Ceratophyllum demersum 5 4 CH_cde_34 5 10 0.000000036714
Cardamine hirsuta Chr1 4 CH_chi_126 4 4 0.000000228181
Carya illinoinensis Chr14 4 CH_cil_242 4 5 0.00000131033
Carya illinoinensis Chr13 4 CH_cil_357 4 11 0.0000857991
Carya illinoinensis Chr05 4 CH_cil_382 3 3 0.00015975
Cucumis melo chr07 4 CH_cme_163 3 3 0.0000659568
Chenopodium quinoa C_Quinoa_Scaffold_2716 4 CH_cqu_399 3 3 0.000161329
Chenopodium quinoa C_Quinoa_Scaffold_2493 4 CH_cqu_505 5 48 0.000592547
Chenopodium quinoa C_Quinoa_Scaffold_1280 4 CH_cqu_510 3 4 0.000644566
Capsella rubella scaffold_5 4 CH_cru_236 3 3 0.000106205
Capsella rubella scaffold_1 4 CH_cru_237 3 3 0.000106205
Cucumis sativus L. chr4 4 CH_csa_100 4 4 0.000000128826
Daucus carota DCARv2_Chr9 4 CH_dca_273 3 3 0.000134844
Davidia involucrata GWHABJS00000009 4 CH_din_257 3 3 0.0000878936
Eucalyptus grandis Chr07 4 CH_egr_561 4 8 0.00000309775
Erythranthe guttata scaffold_14 4 CH_egut_96 6 14 0.000000000378798
Eutrema salsugineum scaffold_4 4 CH_esa_170 3 3 0.000141047
Fragaria vesca Fvb7 4 CH_fve_120 6 25 0.0000000387166
Gossypium hirsutum A08 4 CH_ghi_129 6 9 0.0000000000982147
Gossypium hirsutum D08 4 CH_ghi_130 6 9 0.0000000000982147
Gossypium hirsutum A02 4 CH_ghi_546 3 3 0.000307987
Gossypium hirsutum D12 4 CH_ghi_547 3 3 0.000307987
Glycine max Gm14 4 CH_gma_357 3 3 0.000205908
Gossypium raimondii Chr08 4 CH_gra_273 3 3 0.000171205
Gossypium raimondii Chr04 4 CH_gra_66 6 8 0.0000000000189109
Helianthus annuus HanXRQChr14 4 CH_han_543 3 4 0.00012706
Hydrangea macrophylla Hma1.2p1_0292F.1 4 CH_hma_105 3 3 0.00000673812
Lupinus albus Lalb_Chr20 4 CH_lal_314 3 3 0.000236148
Lupinus albus Lalb_Chr18 4 CH_lal_315 3 3 0.000236148
Lupinus albus Lalb_Chr20 4 CH_lal_415 3 4 0.000943304
Lotus japonicus chr6 4 CH_lja_132 5 13 0.00000104363
Magnolia biondii Chr15 4 CH_mbi_87 8 70 0.0000000000332141
Malus domestica Chr16 4 CH_mdo_517 3 3 0.000170578
Malus domestica Chr07 4 CH_mdo_519 4 13 0.000173936
Medicago truncatula chr5 4 CH_mtr_504 5 33 0.0000475309
Medicago truncatula chr7 4 CH_mtr_507 4 11 0.0000522448
Nelumbo nucifera chr2 4 CH_nnu_299 3 6 0.000563419
Punica granatum NC_045134.1 4 CH_pgr_247 3 3 0.0000712491
Prunus persica Pp06 4 CH_ppe_131 5 5 0.000000000545658
Prunus persica Pp02 4 CH_ppe_207 4 4 0.000000311234
Pisum sativum chr5LG3 4 CH_psa_251 3 3 0.000101241
Papaver somniferum NW_020620492.1 4 CH_pso_115 9 69 0.0000000000126661
Papaver somniferum NC_039362.1 4 CH_pso_140 7 28 0.000000000236815
Papaver somniferum NC_039358.1 4 CH_pso_400 4 9 0.0000190256
Papaver somniferum NW_020620714.1 4 CH_pso_636 3 4 0.000538133
Phaseolus vulgaris Chr06 4 CH_pvu_212 4 9 0.0000342921
Quercus lobata 1 4 CH_qlo_574 5 19 0.00000394057
Quercus lobata 7 4 CH_qlo_805 3 3 0.00015122
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_482 3 3 0.000038655
Simmondsia chinensis GWHAASQ00000025 4 CH_sci_184 5 38 0.000160966
Sechium edule LG06 4 CH_sed_189 3 3 0.000101115
Sequoiadendron giganteum chr9 4 CH_sgi_500 4 4 0.00000000950549
Sequoiadendron giganteum chr7 4 CH_sgi_870 3 3 0.0000144529
Sapria himalayana scaffold26_7557582 4 CH_shi_125 4 18 0.0000181149
Sapria himalayana scaffold6_19132642 4 CH_shi_134 3 4 0.0000396882
Schrenkiella parvula ch6-6 4 CH_spa_139 3 3 0.000150782
Trochodendron aralioides group16 4 CH_tar_300 3 3 0.0000935153
Trochodendron aralioides group7 4 CH_tar_502 3 5 0.000933203
Theobroma cacao Chromosome_5 4 CH_tca_290 3 3 0.0000923696
Tarenaya hassleriana NW_010969548.1 4 CH_tha_114 3 3 0.00011109
Tarenaya hassleriana NW_010967707.1 4 CH_tha_115 3 3 0.00011109
Trifolium pratense Tp57577_TGAC_v2_scaf_467 4 CH_tpr_246 3 3 0.000130479
Vaccinium macrocarpon chr4_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_267 3 3 0.000171548
Vanilla planifolia CM028155.1 4 CH_vpl_180 3 3 0.0000584727
Vanilla planifolia JADCNL010000016.1 4 CH_vpl_181 3 3 0.0000584727
Vitis vinifera chr6 4 CH_vvi_221 4 9 0.0000122145
Vitis vinifera chr2 4 CH_vvi_91 5 5 0.00000000012604

Available child term results

Ontology identifier Description Number of clusters
GO:0005451 monovalent cation:proton antiporter activity 22
GO:0010348 lithium:proton antiporter activity 8
GO:0015369 calcium:proton antiporter activity 18
GO:0015385 sodium:proton antiporter activity 4
GO:0015386 potassium:proton antiporter activity 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001