Functional clusters

Information

  • Type Gene Ontology
  • Description cation transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carpinus fangiana Cfa08 3 CH_cfa_139 6 8 0.00000102103
Populus trichocarpa Chr10 3 CH_ptr_437 4 4 0.000590627
Quercus lobata 4 3 CH_qlo_14 30 80 2.10916e-33
Simmondsia chinensis GWHAASQ00000003 3 CH_sci_231 4 4 0.000395081
Solanum lycopersicum SL4.0ch09 3 CH_sly_388 6 14 0.000129168
Carpinus fangiana Cfa08 4 CH_cfa_139 6 8 0.00000102103
Populus trichocarpa Chr10 4 CH_ptr_437 4 4 0.000590627
Quercus lobata 4 4 CH_qlo_14 30 80 2.10916e-33
Simmondsia chinensis GWHAASQ00000003 4 CH_sci_231 4 4 0.000395081
Solanum lycopersicum SL4.0ch09 4 CH_sly_388 6 14 0.000129168

Available child term results

Ontology identifier Description Number of clusters
GO:0000064 L-ornithine transmembrane transporter activity 2
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity 2
GO:0004129 cytochrome-c oxidase activity 16
GO:0005222 intracellular cAMP-activated cation channel activity 4
GO:0005223 intracellular cGMP-activated cation channel activity 4
GO:0005227 calcium activated cation channel activity 42
GO:0005245 voltage-gated calcium channel activity 40
GO:0005249 voltage-gated potassium channel activity 16
GO:0005262 calcium channel activity 4
GO:0005267 potassium channel activity 20
GO:0005272 sodium channel activity 32
GO:0005351 carbohydrate:proton symporter activity 16
GO:0005358 high-affinity glucose:proton symporter activity 4
GO:0005364 maltose:proton symporter activity 2
GO:0005366 myo-inositol:proton symporter activity 2
GO:0005384 manganese ion transmembrane transporter activity 2
GO:0005385 zinc ion transmembrane transporter activity 8
GO:0005388 P-type calcium transporter activity 68
GO:0005432 calcium:sodium antiporter activity 34
GO:0005451 monovalent cation:proton antiporter activity 22
GO:0008121 ubiquinol-cytochrome-c reductase activity 40
GO:0008273 calcium, potassium:sodium antiporter activity 2
GO:0008506 sucrose:proton symporter activity 2
GO:0008511 sodium:potassium:chloride symporter activity 4
GO:0008519 ammonium transmembrane transporter activity 2
GO:0008551 P-type cadmium transporter activity 2
GO:0008553 P-type proton-exporting transporter activity 10
GO:0009671 nitrate:proton symporter activity 4
GO:0009674 potassium:sodium symporter activity 14
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 20
GO:0010348 lithium:proton antiporter activity 8
GO:0010486 manganese:proton antiporter activity 10
GO:0015078 proton transmembrane transporter activity 4
GO:0015079 potassium ion transmembrane transporter activity 114
GO:0015081 sodium ion transmembrane transporter activity 8
GO:0015086 cadmium ion transmembrane transporter activity 2
GO:0015087 cobalt ion transmembrane transporter activity 8
GO:0015089 high-affinity copper ion transmembrane transporter activity 6
GO:0015095 magnesium ion transmembrane transporter activity 2
GO:0015186 L-glutamine transmembrane transporter activity 10
GO:0015194 L-serine transmembrane transporter activity 4
GO:0015200 methylammonium transmembrane transporter activity 2
GO:0015220 choline transmembrane transporter activity 6
GO:0015226 carnitine transmembrane transporter activity 42
GO:0015269 calcium-activated potassium channel activity 30
GO:0015271 outward rectifier potassium channel activity 4
GO:0015299 solute:proton antiporter activity 170
GO:0015368 calcium:cation antiporter activity 10
GO:0015369 calcium:proton antiporter activity 18
GO:0015377 cation:chloride symporter activity 22
GO:0015385 sodium:proton antiporter activity 4
GO:0015386 potassium:proton antiporter activity 10
GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity 6
GO:0015444 P-type magnesium transporter activity 4
GO:0015505 uracil:cation symporter activity 22
GO:0019829 ATPase-coupled cation transmembrane transporter activity 22
GO:0022821 potassium ion antiporter activity 20
GO:0022843 voltage-gated cation channel activity 2
GO:0022883 zinc efflux transmembrane transporter activity 8
GO:0022890 inorganic cation transmembrane transporter activity 2
GO:0030171 voltage-gated proton channel activity 2
GO:0046873 metal ion transmembrane transporter activity 12
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2
GO:0046961 proton-transporting ATPase activity, rotational mechanism 6
GO:0055055 D-glucose:proton symporter activity 22
GO:0080122 AMP transmembrane transporter activity 2
GO:0090417 N-methylnicotinate transmembrane transporter activity 4
GO:0090448 glucosinolate:proton symporter activity 6
GO:0099604 ligand-gated calcium channel activity 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001