Functional clusters

Information

  • Type Gene Ontology
  • Description ATPase-coupled cation transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica napus A03 3 CH_bna_408 5 26 0.0000338344
Brassica napus C07 3 CH_bna_414 5 27 0.0000414771
Brassica oleracea C7 3 CH_bol_195 5 23 0.00000522903
Brassica rapa A03 3 CH_bra_161 5 24 0.0000366785
Carpinus fangiana Cfa05 3 CH_cfa_311 3 4 0.000487758
Carya illinoinensis Chr11 3 CH_cil_434 3 3 0.000240109
Davidia involucrata GWHABJS00000001 3 CH_din_177 4 6 0.00000404713
Gossypium hirsutum A08 3 CH_ghi_666 3 4 0.000848203
Magnolia biondii Chr17 3 CH_mbi_671 3 7 0.000881958
Malus domestica Chr01 3 CH_mdo_413 4 10 0.0000414849
Quercus lobata 11 3 CH_qlo_864 3 3 0.000238466
Brassica napus A03 4 CH_bna_408 5 26 0.0000338344
Brassica napus C07 4 CH_bna_414 5 27 0.0000414771
Brassica oleracea C7 4 CH_bol_195 5 23 0.00000522903
Brassica rapa A03 4 CH_bra_161 5 24 0.0000366785
Carpinus fangiana Cfa05 4 CH_cfa_311 3 4 0.000487758
Carya illinoinensis Chr11 4 CH_cil_434 3 3 0.000240109
Davidia involucrata GWHABJS00000001 4 CH_din_177 4 6 0.00000404713
Gossypium hirsutum A08 4 CH_ghi_666 3 4 0.000848203
Magnolia biondii Chr17 4 CH_mbi_671 3 7 0.000881958
Malus domestica Chr01 4 CH_mdo_413 4 10 0.0000414849
Quercus lobata 11 4 CH_qlo_864 3 3 0.000238466

Available child term results

Ontology identifier Description Number of clusters
GO:0005388 P-type calcium transporter activity 68
GO:0008551 P-type cadmium transporter activity 2
GO:0008553 P-type proton-exporting transporter activity 10
GO:0015444 P-type magnesium transporter activity 4
GO:0046961 proton-transporting ATPase activity, rotational mechanism 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001