Functional clusters
Information
- Type Gene Ontology
- Description ATPase-coupled cation transmembrane transporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Brassica napus | A03 | 3 | CH_bna_408 | 5 | 26 | 0.0000338344 |
Brassica napus | C07 | 3 | CH_bna_414 | 5 | 27 | 0.0000414771 |
Brassica oleracea | C7 | 3 | CH_bol_195 | 5 | 23 | 0.00000522903 |
Brassica rapa | A03 | 3 | CH_bra_161 | 5 | 24 | 0.0000366785 |
Carpinus fangiana | Cfa05 | 3 | CH_cfa_311 | 3 | 4 | 0.000487758 |
Carya illinoinensis | Chr11 | 3 | CH_cil_434 | 3 | 3 | 0.000240109 |
Davidia involucrata | GWHABJS00000001 | 3 | CH_din_177 | 4 | 6 | 0.00000404713 |
Gossypium hirsutum | A08 | 3 | CH_ghi_666 | 3 | 4 | 0.000848203 |
Magnolia biondii | Chr17 | 3 | CH_mbi_671 | 3 | 7 | 0.000881958 |
Malus domestica | Chr01 | 3 | CH_mdo_413 | 4 | 10 | 0.0000414849 |
Quercus lobata | 11 | 3 | CH_qlo_864 | 3 | 3 | 0.000238466 |
Brassica napus | A03 | 4 | CH_bna_408 | 5 | 26 | 0.0000338344 |
Brassica napus | C07 | 4 | CH_bna_414 | 5 | 27 | 0.0000414771 |
Brassica oleracea | C7 | 4 | CH_bol_195 | 5 | 23 | 0.00000522903 |
Brassica rapa | A03 | 4 | CH_bra_161 | 5 | 24 | 0.0000366785 |
Carpinus fangiana | Cfa05 | 4 | CH_cfa_311 | 3 | 4 | 0.000487758 |
Carya illinoinensis | Chr11 | 4 | CH_cil_434 | 3 | 3 | 0.000240109 |
Davidia involucrata | GWHABJS00000001 | 4 | CH_din_177 | 4 | 6 | 0.00000404713 |
Gossypium hirsutum | A08 | 4 | CH_ghi_666 | 3 | 4 | 0.000848203 |
Magnolia biondii | Chr17 | 4 | CH_mbi_671 | 3 | 7 | 0.000881958 |
Malus domestica | Chr01 | 4 | CH_mdo_413 | 4 | 10 | 0.0000414849 |
Quercus lobata | 11 | 4 | CH_qlo_864 | 3 | 3 | 0.000238466 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0005388 | P-type calcium transporter activity | 68 |
GO:0008551 | P-type cadmium transporter activity | 2 |
GO:0008553 | P-type proton-exporting transporter activity | 10 |
GO:0015444 | P-type magnesium transporter activity | 4 |
GO:0046961 | proton-transporting ATPase activity, rotational mechanism | 6 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |