Functional clusters

Information

  • Type Gene Ontology
  • Description sodium ion transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 3 CH_arhy_399 3 3 0.00000804534
Eucalyptus grandis Chr03 3 CH_egr_309 6 20 0.000000000282173
Sequoiadendron giganteum chr4 3 CH_sgi_497 4 5 0.00000000839968
Vitis vinifera chr11 3 CH_vvi_192 4 13 0.00000287676
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.15 4 CH_arhy_399 3 3 0.00000804534
Eucalyptus grandis Chr03 4 CH_egr_309 6 20 0.000000000282173
Sequoiadendron giganteum chr4 4 CH_sgi_497 4 5 0.00000000839968
Vitis vinifera chr11 4 CH_vvi_192 4 13 0.00000287676

Available child term results

Ontology identifier Description Number of clusters
GO:0005272 sodium channel activity 32
GO:0005432 calcium:sodium antiporter activity 34
GO:0008273 calcium, potassium:sodium antiporter activity 2
GO:0008511 sodium:potassium:chloride symporter activity 4
GO:0009674 potassium:sodium symporter activity 14
GO:0015385 sodium:proton antiporter activity 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001