Functional clusters
Information
- Type Gene Ontology
- Description monosaccharide transmembrane transporter activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr7 | 3 | CH_acertr_203 | 3 | 3 | 0.00000339203 |
| Actinidia chinensis | Lachesis_group3 | 3 | CH_ach_147 | 4 | 24 | 0.000103489 |
| Brassica carinata | ChrC09 | 3 | CH_bca_440 | 3 | 3 | 0.0000134345 |
| Brassica carinata | ChrB04 | 3 | CH_bca_441 | 3 | 3 | 0.0000134345 |
| Brassica napus | A01 | 3 | CH_bna_120 | 5 | 10 | 0.00000000144859 |
| Brassica rapa | A01 | 3 | CH_bra_108 | 4 | 9 | 0.00000156185 |
| Cannabis sativa | NC_044377.1 | 3 | CH_cansat_189 | 3 | 4 | 0.0000398223 |
| Capsicum annuum | PGAv.1.6.scaffold485 | 3 | CH_can_212 | 3 | 3 | 0.00000372633 |
| Coffea canephora | chr2 | 3 | CH_ccan_53 | 4 | 15 | 0.00000000189264 |
| Citrus clementina | scaffold_9 | 3 | CH_ccl_16 | 12 | 17 | 2.30801e-28 |
| Citrus clementina | scaffold_9 | 3 | CH_ccl_332 | 3 | 4 | 0.000181327 |
| Carya illinoinensis | Chr10 | 3 | CH_cil_299 | 3 | 3 | 0.0000188795 |
| Cucumis melo | chr06 | 3 | CH_cme_74 | 4 | 4 | 0.0000000112681 |
| Capsella rubella | scaffold_6 | 3 | CH_cru_244 | 3 | 5 | 0.000141852 |
| Cucumis sativus L. | chr3 | 3 | CH_csa_82 | 4 | 4 | 0.0000000220775 |
| Davidia involucrata | GWHABJS00000016 | 3 | CH_din_214 | 3 | 4 | 0.0000265683 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_509 | 4 | 6 | 0.000000912078 |
| Eucalyptus grandis | Chr06 | 3 | CH_egr_665 | 3 | 3 | 0.0000547747 |
| Erythranthe guttata | scaffold_7 | 3 | CH_egut_172 | 4 | 5 | 0.000000340821 |
| Erythranthe guttata | scaffold_6 | 3 | CH_egut_260 | 3 | 3 | 0.0000567862 |
| Erythranthe guttata | scaffold_12 | 3 | CH_egut_85 | 8 | 49 | 0.0000000000449246 |
| Fragaria x ananassa | Fvb4-1 | 3 | CH_fan_367 | 3 | 4 | 0.0000855542 |
| Fragaria x ananassa | Fvb4-4 | 3 | CH_fan_42 | 6 | 14 | 0.0000000000109482 |
| Fragaria vesca | Fvb2 | 3 | CH_fve_216 | 3 | 3 | 0.0000190219 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_44 | 7 | 18 | 0.000000000000162491 |
| Gossypium hirsutum | D09 | 3 | CH_ghi_363 | 3 | 3 | 0.0000122776 |
| Glycine max | Gm04 | 3 | CH_gma_269 | 3 | 3 | 0.0000248082 |
| Gossypium raimondii | Chr06 | 3 | CH_gra_197 | 3 | 4 | 0.0000348884 |
| Lotus japonicus | chr1 | 3 | CH_lja_190 | 3 | 3 | 0.0000280273 |
| Malus domestica | Chr13 | 3 | CH_mdo_46 | 7 | 13 | 0.00000000000000900524 |
| Malus domestica | Chr16 | 3 | CH_mdo_95 | 5 | 6 | 0.0000000000697021 |
| Medicago truncatula | chr1 | 3 | CH_mtr_438 | 3 | 3 | 0.0000151526 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_208 | 3 | 7 | 0.000117889 |
| Olea europaea | scaffold256 | 3 | CH_oeu_143 | 4 | 24 | 0.0000351785 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_121 | 5 | 14 | 0.0000000177328 |
| Petunia axillaris | Peaxi162Scf00360 | 3 | CH_pax_217 | 3 | 5 | 0.0000845647 |
| Prunus persica | Pp01 | 3 | CH_ppe_26 | 8 | 8 | 8.99575e-21 |
| Prunus persica | Pp02 | 3 | CH_ppe_277 | 3 | 3 | 0.0000244156 |
| Papaver somniferum | NC_039358.1 | 3 | CH_pso_374 | 3 | 3 | 0.0000108038 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_403 | 3 | 5 | 0.000357283 |
| Phaseolus vulgaris | Chr09 | 3 | CH_pvu_108 | 4 | 4 | 0.0000000623084 |
| Phaseolus vulgaris | Chr05 | 3 | CH_pvu_222 | 3 | 3 | 0.0000529991 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_106 | 6 | 10 | 0.00000000000022566 |
| Rhododendron simsii | chr04 | 3 | CH_rsi_114 | 5 | 6 | 0.0000000000629689 |
| Rhododendron simsii | chr03 | 3 | CH_rsi_139 | 5 | 8 | 0.000000000586977 |
| Striga asiatica | scaffold60 | 3 | CH_sas_42 | 3 | 3 | 0.0000118738 |
| Striga asiatica | scaffold39 | 3 | CH_sas_53 | 3 | 5 | 0.0000474705 |
| Striga asiatica | scaffold44 | 3 | CH_sas_9 | 5 | 8 | 0.000000000272663 |
| Salvia bowleyana | GWHASIU00000007 | 3 | CH_sbo_304 | 3 | 4 | 0.0000322804 |
| Salix brachista | GWHAAZH00000008 | 3 | CH_sbr_253 | 3 | 4 | 0.0000870014 |
| Salix brachista | GWHAAZH00000001 | 3 | CH_sbr_58 | 5 | 5 | 0.0000000000140457 |
| Simmondsia chinensis | GWHAASQ00000017 | 3 | CH_sci_17 | 6 | 10 | 0.0000000000155133 |
| Sechium edule | LG03 | 3 | CH_sed_157 | 3 | 3 | 0.0000416554 |
| Sechium edule | LG13 | 3 | CH_sed_158 | 3 | 3 | 0.0000416554 |
| Sechium edule | LG11 | 3 | CH_sed_87 | 4 | 5 | 0.000000222707 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_492 | 4 | 4 | 0.0000000071018 |
| Theobroma cacao | Chromosome_2 | 3 | CH_tca_224 | 3 | 3 | 0.0000142497 |
| Theobroma cacao | Chromosome_4 | 3 | CH_tca_258 | 3 | 4 | 0.0000569654 |
| Theobroma cacao | Chromosome_3 | 3 | CH_tca_305 | 3 | 5 | 0.00014233 |
| Tarenaya hassleriana | NW_010964923.1 | 3 | CH_tha_143 | 3 | 5 | 0.000239413 |
| Tarenaya hassleriana | NW_010960188.1 | 3 | CH_tha_80 | 4 | 12 | 0.0000103036 |
| Tripterygium wilfordii | NC_052245.1 | 3 | CH_twi_222 | 3 | 4 | 0.00010182 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_183 | 3 | 3 | 0.0000297916 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_20 | 7 | 12 | 0.0000000000000192409 |
| Vigna mungo | CM024072.1 | 3 | CH_vmu_141 | 3 | 3 | 0.0000126757 |
| Vitis vinifera | chr14 | 3 | CH_vvi_256 | 3 | 4 | 0.0000534298 |
| Acer truncatum | chr7 | 4 | CH_acertr_203 | 3 | 3 | 0.00000339203 |
| Actinidia chinensis | Lachesis_group3 | 4 | CH_ach_147 | 4 | 24 | 0.000103489 |
| Brassica carinata | ChrC09 | 4 | CH_bca_440 | 3 | 3 | 0.0000134345 |
| Brassica carinata | ChrB04 | 4 | CH_bca_441 | 3 | 3 | 0.0000134345 |
| Brassica napus | A01 | 4 | CH_bna_120 | 5 | 10 | 0.00000000144859 |
| Brassica rapa | A01 | 4 | CH_bra_108 | 4 | 9 | 0.00000156185 |
| Cannabis sativa | NC_044377.1 | 4 | CH_cansat_189 | 3 | 4 | 0.0000398223 |
| Capsicum annuum | PGAv.1.6.scaffold485 | 4 | CH_can_212 | 3 | 3 | 0.00000372633 |
| Coffea canephora | chr2 | 4 | CH_ccan_53 | 4 | 15 | 0.00000000189264 |
| Citrus clementina | scaffold_9 | 4 | CH_ccl_16 | 12 | 17 | 2.30801e-28 |
| Citrus clementina | scaffold_9 | 4 | CH_ccl_332 | 3 | 4 | 0.000181327 |
| Carya illinoinensis | Chr10 | 4 | CH_cil_299 | 3 | 3 | 0.0000188795 |
| Cucumis melo | chr06 | 4 | CH_cme_74 | 4 | 4 | 0.0000000112681 |
| Capsella rubella | scaffold_6 | 4 | CH_cru_244 | 3 | 5 | 0.000141852 |
| Cucumis sativus L. | chr3 | 4 | CH_csa_82 | 4 | 4 | 0.0000000220775 |
| Davidia involucrata | GWHABJS00000016 | 4 | CH_din_214 | 3 | 4 | 0.0000265683 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_509 | 4 | 6 | 0.000000912078 |
| Eucalyptus grandis | Chr06 | 4 | CH_egr_665 | 3 | 3 | 0.0000547747 |
| Erythranthe guttata | scaffold_7 | 4 | CH_egut_172 | 4 | 5 | 0.000000340821 |
| Erythranthe guttata | scaffold_6 | 4 | CH_egut_260 | 3 | 3 | 0.0000567862 |
| Erythranthe guttata | scaffold_12 | 4 | CH_egut_85 | 8 | 49 | 0.0000000000449246 |
| Fragaria x ananassa | Fvb4-1 | 4 | CH_fan_367 | 3 | 4 | 0.0000855542 |
| Fragaria x ananassa | Fvb4-4 | 4 | CH_fan_42 | 6 | 14 | 0.0000000000109482 |
| Fragaria vesca | Fvb2 | 4 | CH_fve_216 | 3 | 3 | 0.0000190219 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_44 | 7 | 18 | 0.000000000000162491 |
| Gossypium hirsutum | D09 | 4 | CH_ghi_363 | 3 | 3 | 0.0000122776 |
| Glycine max | Gm04 | 4 | CH_gma_269 | 3 | 3 | 0.0000248082 |
| Gossypium raimondii | Chr06 | 4 | CH_gra_197 | 3 | 4 | 0.0000348884 |
| Lotus japonicus | chr1 | 4 | CH_lja_190 | 3 | 3 | 0.0000280273 |
| Malus domestica | Chr13 | 4 | CH_mdo_46 | 7 | 13 | 0.00000000000000900524 |
| Malus domestica | Chr16 | 4 | CH_mdo_95 | 5 | 6 | 0.0000000000697021 |
| Medicago truncatula | chr1 | 4 | CH_mtr_438 | 3 | 3 | 0.0000151526 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_208 | 3 | 7 | 0.000117889 |
| Olea europaea | scaffold256 | 4 | CH_oeu_143 | 4 | 24 | 0.0000351785 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_121 | 5 | 14 | 0.0000000177328 |
| Petunia axillaris | Peaxi162Scf00360 | 4 | CH_pax_217 | 3 | 5 | 0.0000845647 |
| Prunus persica | Pp01 | 4 | CH_ppe_26 | 8 | 8 | 8.99575e-21 |
| Prunus persica | Pp02 | 4 | CH_ppe_277 | 3 | 3 | 0.0000244156 |
| Papaver somniferum | NC_039358.1 | 4 | CH_pso_374 | 3 | 3 | 0.0000108038 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_403 | 3 | 5 | 0.000357283 |
| Phaseolus vulgaris | Chr09 | 4 | CH_pvu_108 | 4 | 4 | 0.0000000623084 |
| Phaseolus vulgaris | Chr05 | 4 | CH_pvu_222 | 3 | 3 | 0.0000529991 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_106 | 6 | 10 | 0.00000000000022566 |
| Rhododendron simsii | chr04 | 4 | CH_rsi_114 | 5 | 6 | 0.0000000000629689 |
| Rhododendron simsii | chr03 | 4 | CH_rsi_139 | 5 | 8 | 0.000000000586977 |
| Striga asiatica | scaffold60 | 4 | CH_sas_42 | 3 | 3 | 0.0000118738 |
| Striga asiatica | scaffold39 | 4 | CH_sas_53 | 3 | 5 | 0.0000474705 |
| Striga asiatica | scaffold44 | 4 | CH_sas_9 | 5 | 8 | 0.000000000272663 |
| Salvia bowleyana | GWHASIU00000007 | 4 | CH_sbo_304 | 3 | 4 | 0.0000322804 |
| Salix brachista | GWHAAZH00000008 | 4 | CH_sbr_253 | 3 | 4 | 0.0000870014 |
| Salix brachista | GWHAAZH00000001 | 4 | CH_sbr_58 | 5 | 5 | 0.0000000000140457 |
| Simmondsia chinensis | GWHAASQ00000017 | 4 | CH_sci_17 | 6 | 10 | 0.0000000000155133 |
| Sechium edule | LG03 | 4 | CH_sed_157 | 3 | 3 | 0.0000416554 |
| Sechium edule | LG13 | 4 | CH_sed_158 | 3 | 3 | 0.0000416554 |
| Sechium edule | LG11 | 4 | CH_sed_87 | 4 | 5 | 0.000000222707 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_492 | 4 | 4 | 0.0000000071018 |
| Theobroma cacao | Chromosome_2 | 4 | CH_tca_224 | 3 | 3 | 0.0000142497 |
| Theobroma cacao | Chromosome_4 | 4 | CH_tca_258 | 3 | 4 | 0.0000569654 |
| Theobroma cacao | Chromosome_3 | 4 | CH_tca_305 | 3 | 5 | 0.00014233 |
| Tarenaya hassleriana | NW_010964923.1 | 4 | CH_tha_143 | 3 | 5 | 0.000239413 |
| Tarenaya hassleriana | NW_010960188.1 | 4 | CH_tha_80 | 4 | 12 | 0.0000103036 |
| Tripterygium wilfordii | NC_052245.1 | 4 | CH_twi_222 | 3 | 4 | 0.00010182 |
| Vaccinium macrocarpon | chr10_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_183 | 3 | 3 | 0.0000297916 |
| Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_20 | 7 | 12 | 0.0000000000000192409 |
| Vigna mungo | CM024072.1 | 4 | CH_vmu_141 | 3 | 3 | 0.0000126757 |
| Vitis vinifera | chr14 | 4 | CH_vvi_256 | 3 | 4 | 0.0000534298 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0005354 | galactose transmembrane transporter activity | 2 |
| GO:0005355 | glucose transmembrane transporter activity | 2 |
| GO:0005358 | high-affinity glucose:proton symporter activity | 4 |
| GO:0015148 | D-xylose transmembrane transporter activity | 24 |
| GO:0015284 | fructose uniporter activity | 6 |
| GO:0042900 | arabinose transmembrane transporter activity | 4 |
| GO:0055055 | D-glucose:proton symporter activity | 22 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |