Functional clusters
Information
- Type Gene Ontology
- Description secondary active sulfate transmembrane transporter activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Acer truncatum | chr13 | 3 | CH_acertr_70 | 4 | 4 | 0.00000000143487 |
| Actinidia chinensis | Lachesis_group19 | 3 | CH_ach_85 | 3 | 3 | 0.000005046 |
| Avicennia marina | ScioBoG_26769_HRSCAF_26899 | 3 | CH_ama_45 | 3 | 4 | 0.0000249684 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 3 | CH_arhy_421 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 3 | CH_arhy_479 | 3 | 4 | 0.0000762753 |
| Brassica carinata | ChrC08 | 3 | CH_bca_218 | 4 | 7 | 0.0000000842842 |
| Brassica napus | A04 | 3 | CH_bna_328 | 3 | 3 | 0.00000952166 |
| Brassica napus | C09 | 3 | CH_bna_329 | 3 | 3 | 0.00000952166 |
| Corylus avellana | 9 | 3 | CH_cav_269 | 3 | 6 | 0.0000801484 |
| Cucumis sativus L. | chr1 | 3 | CH_csa_84 | 4 | 6 | 0.0000000357049 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 3 | CH_eca_42 | 5 | 10 | 0.0000000000473636 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_608 | 3 | 5 | 0.0000146884 |
| Erythranthe guttata | scaffold_14 | 3 | CH_egut_144 | 4 | 5 | 0.0000000224374 |
| Fragaria x ananassa | Fvb4-2 | 3 | CH_fan_387 | 3 | 6 | 0.000117819 |
| Fragaria vesca | Fvb4 | 3 | CH_fve_53 | 5 | 8 | 0.000000000010121 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 3 | CH_lsa_243 | 3 | 3 | 0.00000269494 |
| Nelumbo nucifera | chr5 | 3 | CH_nnu_56 | 4 | 5 | 0.00000000398903 |
| Nicotiana tabacum | Nitab4.5_0000469 | 3 | CH_nta_17 | 4 | 4 | 0.000000003968 |
| Petunia axillaris | Peaxi162Scf00160 | 3 | CH_pax_159 | 3 | 4 | 0.0000201882 |
| Pisum sativum | chr7LG7 | 3 | CH_psa_189 | 3 | 4 | 0.0000217062 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_69 | 4 | 5 | 0.0000000127387 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_57 | 6 | 9 | 0.00000000000000520792 |
| Quercus lobata | 11 | 3 | CH_qlo_305 | 4 | 4 | 0.00000000160036 |
| Rhododendron simsii | chr11 | 3 | CH_rsi_268 | 3 | 3 | 0.00000284217 |
| Salvia bowleyana | GWHASIU00000005 | 3 | CH_sbo_241 | 3 | 3 | 0.00000253382 |
| Sequoiadendron giganteum | chr1 | 3 | CH_sgi_776 | 3 | 4 | 0.00000313206 |
| Sequoiadendron giganteum | chr2 | 3 | CH_sgi_832 | 3 | 5 | 0.00000782868 |
| Sapria himalayana | scaffold9_16683904 | 3 | CH_shi_28 | 4 | 5 | 0.0000000000981514 |
| Selenicereus undatus | Scaffold_33679 | 3 | CH_sun_66 | 4 | 19 | 0.00000807364 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_426 | 3 | CH_tpr_125 | 3 | 3 | 0.0000024583 |
| Vitis vinifera | chr11 | 3 | CH_vvi_199 | 3 | 3 | 0.00000394881 |
| Vitis vinifera | chr18 | 3 | CH_vvi_229 | 3 | 4 | 0.0000157892 |
| Acer truncatum | chr13 | 4 | CH_acertr_70 | 4 | 4 | 0.00000000143487 |
| Actinidia chinensis | Lachesis_group19 | 4 | CH_ach_85 | 3 | 3 | 0.000005046 |
| Avicennia marina | ScioBoG_26769_HRSCAF_26899 | 4 | CH_ama_45 | 3 | 4 | 0.0000249684 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.20 | 4 | CH_arhy_421 | 3 | 3 | 0.0000190781 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.10 | 4 | CH_arhy_479 | 3 | 4 | 0.0000762753 |
| Brassica carinata | ChrC08 | 4 | CH_bca_218 | 4 | 7 | 0.0000000842842 |
| Brassica napus | A04 | 4 | CH_bna_328 | 3 | 3 | 0.00000952166 |
| Brassica napus | C09 | 4 | CH_bna_329 | 3 | 3 | 0.00000952166 |
| Corylus avellana | 9 | 4 | CH_cav_269 | 3 | 6 | 0.0000801484 |
| Cucumis sativus L. | chr1 | 4 | CH_csa_84 | 4 | 6 | 0.0000000357049 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 4 | CH_eca_42 | 5 | 10 | 0.0000000000473636 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_608 | 3 | 5 | 0.0000146884 |
| Erythranthe guttata | scaffold_14 | 4 | CH_egut_144 | 4 | 5 | 0.0000000224374 |
| Fragaria x ananassa | Fvb4-2 | 4 | CH_fan_387 | 3 | 6 | 0.000117819 |
| Fragaria vesca | Fvb4 | 4 | CH_fve_53 | 5 | 8 | 0.000000000010121 |
| Lactuca sativa | Lsat_1_v8_lg_9 | 4 | CH_lsa_243 | 3 | 3 | 0.00000269494 |
| Nelumbo nucifera | chr5 | 4 | CH_nnu_56 | 4 | 5 | 0.00000000398903 |
| Nicotiana tabacum | Nitab4.5_0000469 | 4 | CH_nta_17 | 4 | 4 | 0.000000003968 |
| Petunia axillaris | Peaxi162Scf00160 | 4 | CH_pax_159 | 3 | 4 | 0.0000201882 |
| Pisum sativum | chr7LG7 | 4 | CH_psa_189 | 3 | 4 | 0.0000217062 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_69 | 4 | 5 | 0.0000000127387 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_57 | 6 | 9 | 0.00000000000000520792 |
| Quercus lobata | 11 | 4 | CH_qlo_305 | 4 | 4 | 0.00000000160036 |
| Rhododendron simsii | chr11 | 4 | CH_rsi_268 | 3 | 3 | 0.00000284217 |
| Salvia bowleyana | GWHASIU00000005 | 4 | CH_sbo_241 | 3 | 3 | 0.00000253382 |
| Sequoiadendron giganteum | chr1 | 4 | CH_sgi_776 | 3 | 4 | 0.00000313206 |
| Sequoiadendron giganteum | chr2 | 4 | CH_sgi_832 | 3 | 5 | 0.00000782868 |
| Sapria himalayana | scaffold9_16683904 | 4 | CH_shi_28 | 4 | 5 | 0.0000000000981514 |
| Selenicereus undatus | Scaffold_33679 | 4 | CH_sun_66 | 4 | 19 | 0.00000807364 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_426 | 4 | CH_tpr_125 | 3 | 3 | 0.0000024583 |
| Vitis vinifera | chr11 | 4 | CH_vvi_199 | 3 | 3 | 0.00000394881 |
| Vitis vinifera | chr18 | 4 | CH_vvi_229 | 3 | 4 | 0.0000157892 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |