Functional clusters

Information

  • Type Gene Ontology
  • Description ion transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr2 3 CH_acertr_336 9 32 0.0000955639
Fragaria x ananassa Fvb6-2 3 CH_fan_313 7 13 0.0000286277
Olea europaea chr21 3 CH_oeu_299 5 7 0.000407399
Quercus lobata 4 3 CH_qlo_333 17 78 0.00000000531788
Acer truncatum chr2 4 CH_acertr_336 9 32 0.0000955639
Fragaria x ananassa Fvb6-2 4 CH_fan_313 7 13 0.0000286277
Olea europaea chr21 4 CH_oeu_299 5 7 0.000407399
Quercus lobata 4 4 CH_qlo_333 17 78 0.00000000531788

Available child term results

Ontology identifier Description Number of clusters
GO:0000064 L-ornithine transmembrane transporter activity 2
GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity 2
GO:0004129 cytochrome-c oxidase activity 16
GO:0004970 ionotropic glutamate receptor activity 4
GO:0005216 ion channel activity 60
GO:0005222 intracellular cAMP-activated cation channel activity 4
GO:0005223 intracellular cGMP-activated cation channel activity 4
GO:0005227 calcium activated cation channel activity 42
GO:0005230 extracellular ligand-gated ion channel activity 2
GO:0005245 voltage-gated calcium channel activity 40
GO:0005247 voltage-gated chloride channel activity 16
GO:0005249 voltage-gated potassium channel activity 16
GO:0005254 chloride channel activity 8
GO:0005262 calcium channel activity 4
GO:0005267 potassium channel activity 20
GO:0005272 sodium channel activity 32
GO:0005351 carbohydrate:proton symporter activity 16
GO:0005358 high-affinity glucose:proton symporter activity 4
GO:0005364 maltose:proton symporter activity 2
GO:0005366 myo-inositol:proton symporter activity 2
GO:0005384 manganese ion transmembrane transporter activity 2
GO:0005385 zinc ion transmembrane transporter activity 8
GO:0005388 P-type calcium transporter activity 68
GO:0005432 calcium:sodium antiporter activity 34
GO:0005451 monovalent cation:proton antiporter activity 22
GO:0005452 inorganic anion exchanger activity 20
GO:0005460 UDP-glucose transmembrane transporter activity 4
GO:0005464 UDP-xylose transmembrane transporter activity 20
GO:0008121 ubiquinol-cytochrome-c reductase activity 40
GO:0008271 secondary active sulfate transmembrane transporter activity 64
GO:0008273 calcium, potassium:sodium antiporter activity 2
GO:0008308 voltage-gated anion channel activity 14
GO:0008324 cation transmembrane transporter activity 10
GO:0008381 mechanosensitive ion channel activity 10
GO:0008493 tetracycline transmembrane transporter activity 2
GO:0008506 sucrose:proton symporter activity 2
GO:0008509 anion transmembrane transporter activity 4
GO:0008511 sodium:potassium:chloride symporter activity 4
GO:0008514 organic anion transmembrane transporter activity 12
GO:0008519 ammonium transmembrane transporter activity 2
GO:0008521 acetyl-CoA transmembrane transporter activity 2
GO:0008551 P-type cadmium transporter activity 2
GO:0008553 P-type proton-exporting transporter activity 10
GO:0009671 nitrate:proton symporter activity 4
GO:0009673 low-affinity phosphate transmembrane transporter activity 4
GO:0009674 potassium:sodium symporter activity 14
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity 20
GO:0010292 GTP:GDP antiporter activity 2
GO:0010348 lithium:proton antiporter activity 8
GO:0010486 manganese:proton antiporter activity 10
GO:0010542 nitrate efflux transmembrane transporter activity 8
GO:0015078 proton transmembrane transporter activity 4
GO:0015079 potassium ion transmembrane transporter activity 114
GO:0015081 sodium ion transmembrane transporter activity 8
GO:0015083 aluminum ion transmembrane transporter activity 14
GO:0015086 cadmium ion transmembrane transporter activity 2
GO:0015087 cobalt ion transmembrane transporter activity 8
GO:0015089 high-affinity copper ion transmembrane transporter activity 6
GO:0015095 magnesium ion transmembrane transporter activity 2
GO:0015098 molybdate ion transmembrane transporter activity 2
GO:0015105 arsenite transmembrane transporter activity 2
GO:0015108 chloride transmembrane transporter activity 6
GO:0015112 nitrate transmembrane transporter activity 44
GO:0015113 nitrite transmembrane transporter activity 2
GO:0015115 silicate transmembrane transporter activity 12
GO:0015121 phosphoenolpyruvate:phosphate antiporter activity 2
GO:0015129 lactate transmembrane transporter activity 8
GO:0015137 citrate transmembrane transporter activity 30
GO:0015139 alpha-ketoglutarate transmembrane transporter activity 4
GO:0015140 malate transmembrane transporter activity 2
GO:0015183 L-aspartate transmembrane transporter activity 10
GO:0015185 gamma-aminobutyric acid transmembrane transporter activity 46
GO:0015186 L-glutamine transmembrane transporter activity 10
GO:0015194 L-serine transmembrane transporter activity 4
GO:0015200 methylammonium transmembrane transporter activity 2
GO:0015220 choline transmembrane transporter activity 6
GO:0015225 biotin transmembrane transporter activity 12
GO:0015226 carnitine transmembrane transporter activity 42
GO:0015233 pantothenate transmembrane transporter activity 10
GO:0015269 calcium-activated potassium channel activity 30
GO:0015271 outward rectifier potassium channel activity 4
GO:0015276 ligand-gated ion channel activity 324
GO:0015299 solute:proton antiporter activity 170
GO:0015301 anion:anion antiporter activity 2
GO:0015368 calcium:cation antiporter activity 10
GO:0015369 calcium:proton antiporter activity 18
GO:0015377 cation:chloride symporter activity 22
GO:0015385 sodium:proton antiporter activity 4
GO:0015386 potassium:proton antiporter activity 10
GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity 6
GO:0015415 ATPase-coupled phosphate ion transmembrane transporter activity 14
GO:0015444 P-type magnesium transporter activity 4
GO:0015505 uracil:cation symporter activity 22
GO:0019829 ATPase-coupled cation transmembrane transporter activity 22
GO:0022821 potassium ion antiporter activity 20
GO:0022843 voltage-gated cation channel activity 2
GO:0022853 active ion transmembrane transporter activity 10
GO:0022883 zinc efflux transmembrane transporter activity 8
GO:0022890 inorganic cation transmembrane transporter activity 2
GO:0030171 voltage-gated proton channel activity 2
GO:0043879 glycolate transmembrane transporter activity 8
GO:0046873 metal ion transmembrane transporter activity 12
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 2
GO:0046961 proton-transporting ATPase activity, rotational mechanism 6
GO:0050833 pyruvate transmembrane transporter activity 2
GO:0055055 D-glucose:proton symporter activity 22
GO:0080054 low-affinity nitrate transmembrane transporter activity 40
GO:0080122 AMP transmembrane transporter activity 2
GO:0080139 borate efflux transmembrane transporter activity 10
GO:0090417 N-methylnicotinate transmembrane transporter activity 4
GO:0090440 abscisic acid transmembrane transporter activity 4
GO:0090448 glucosinolate:proton symporter activity 6
GO:0099604 ligand-gated calcium channel activity 10
GO:1901683 arsenate ion transmembrane transporter activity 18
GO:1901974 glycerate transmembrane transporter activity 6
GO:1903425 fluoride transmembrane transporter activity 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001