Functional clusters

Information

  • Type Gene Ontology
  • Description polyamine transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis lyrata scaffold_1 3 CH_aly_332 2 2 0.000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 3 CH_amhyb_191 2 2 0.000505051
Arabidopsis thaliana Chr1 3 CH_ath_514 2 2 0.000286492
Brassica carinata ChrB07 3 CH_bca_331 3 4 0.00000124736
Brassica oleracea C5 3 CH_bol_386 2 2 0.000686409
Brassica rapa A09 3 CH_bra_315 2 2 0.000901558
Beta vulgaris Chr4_EL10_PGA_scaffold1 3 CH_bvu_243 2 2 0.00049675
Cannabis sativa NC_044377.1 3 CH_cansat_316 2 2 0.000393985
Cardamine hirsuta Chr1 3 CH_chi_385 2 2 0.000691204
Chenopodium quinoa C_Quinoa_Scaffold_3107 3 CH_cqu_445 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2088 3 CH_cqu_446 2 2 0.000284293
Capsella rubella scaffold_1 3 CH_cru_335 2 2 0.000731154
Eutrema salsugineum scaffold_5 3 CH_esa_273 2 2 0.000761499
Lactuca sativa Lsat_1_v8_lg_6 3 CH_lsa_432 2 2 0.000308404
Magnolia biondii Chr01 3 CH_mbi_472 2 3 0.000145695
Olea europaea chr16 3 CH_oeu_294 2 2 0.000320273
Oryza sativa ssp. japonica chr03 3 CH_osa_227 3 9 0.00000702518
Rhododendron simsii chr07 3 CH_rsi_251 3 4 0.00000139901
Arabidopsis lyrata scaffold_1 4 CH_aly_332 2 2 0.000660044
Amaranthus hybridus AmaHy_arrow1_Scaffold_6 4 CH_amhyb_191 2 2 0.000505051
Arabidopsis thaliana Chr1 4 CH_ath_514 2 2 0.000286492
Brassica carinata ChrB07 4 CH_bca_331 3 4 0.00000124736
Brassica oleracea C5 4 CH_bol_386 2 2 0.000686409
Brassica rapa A09 4 CH_bra_315 2 2 0.000901558
Beta vulgaris Chr4_EL10_PGA_scaffold1 4 CH_bvu_243 2 2 0.00049675
Cannabis sativa NC_044377.1 4 CH_cansat_316 2 2 0.000393985
Cardamine hirsuta Chr1 4 CH_chi_385 2 2 0.000691204
Chenopodium quinoa C_Quinoa_Scaffold_3107 4 CH_cqu_445 2 2 0.000284293
Chenopodium quinoa C_Quinoa_Scaffold_2088 4 CH_cqu_446 2 2 0.000284293
Capsella rubella scaffold_1 4 CH_cru_335 2 2 0.000731154
Eutrema salsugineum scaffold_5 4 CH_esa_273 2 2 0.000761499
Lactuca sativa Lsat_1_v8_lg_6 4 CH_lsa_432 2 2 0.000308404
Magnolia biondii Chr01 4 CH_mbi_472 2 3 0.000145695
Olea europaea chr16 4 CH_oeu_294 2 2 0.000320273
Oryza sativa ssp. japonica chr03 4 CH_osa_227 3 9 0.00000702518
Rhododendron simsii chr07 4 CH_rsi_251 3 4 0.00000139901

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001