Functional clusters
Information
- Type Gene Ontology
- Description voltage-gated calcium channel activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 3 | CH_ama_1 | 9 | 9 | 4.33493e-30 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 3 | CH_atr_198 | 2 | 2 | 0.0000794407 |
| Cicer arietinum L. | Ca_LG1_v3 | 3 | CH_car_113 | 2 | 2 | 0.0000778301 |
| Carya illinoinensis | Chr04 | 3 | CH_cil_404 | 2 | 2 | 0.000185948 |
| Daucus carota | DCARv2_Chr4 | 3 | CH_dca_340 | 2 | 2 | 0.000382665 |
| Eucalyptus grandis | Chr11 | 3 | CH_egr_363 | 3 | 3 | 0.00000000513834 |
| Erythranthe guttata | scaffold_8 | 3 | CH_egut_277 | 2 | 2 | 0.0000728147 |
| Gossypium hirsutum | D02 | 3 | CH_ghi_421 | 2 | 3 | 0.0000801047 |
| Nelumbo nucifera | chr1 | 3 | CH_nnu_52 | 3 | 4 | 0.00000000348038 |
| Nicotiana tabacum | Nitab4.5_0000512 | 3 | CH_nta_133 | 2 | 2 | 0.000658364 |
| Nicotiana tabacum | Nitab4.5_0000638 | 3 | CH_nta_134 | 2 | 2 | 0.000658364 |
| Olea europaea | chr13 | 3 | CH_oeu_220 | 2 | 2 | 0.000160137 |
| Petunia axillaris | Peaxi162Scf00132 | 3 | CH_pax_51 | 3 | 3 | 0.00000000742514 |
| Quercus lobata | 8 | 3 | CH_qlo_399 | 3 | 5 | 0.0000000399821 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 3 | CH_rch_575 | 2 | 3 | 0.000119593 |
| Salix brachista | GWHAAZH00000013 | 3 | CH_sbr_235 | 2 | 2 | 0.000063014 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_258 | 4 | 4 | 0.000000000000346852 |
| Sapria himalayana | scaffold10_15062905 | 3 | CH_shi_27 | 4 | 9 | 0.0000000000706658 |
| Trochodendron aralioides | group9 | 3 | CH_tar_82 | 3 | 3 | 0.00000000540676 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_218 | 2 | 2 | 0.0000929238 |
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 4 | CH_ama_1 | 9 | 9 | 4.33493e-30 |
| Amborella trichopoda | AmTr_v1.0_scaffold00068 | 4 | CH_atr_198 | 2 | 2 | 0.0000794407 |
| Cicer arietinum L. | Ca_LG1_v3 | 4 | CH_car_113 | 2 | 2 | 0.0000778301 |
| Carya illinoinensis | Chr04 | 4 | CH_cil_404 | 2 | 2 | 0.000185948 |
| Daucus carota | DCARv2_Chr4 | 4 | CH_dca_340 | 2 | 2 | 0.000382665 |
| Eucalyptus grandis | Chr11 | 4 | CH_egr_363 | 3 | 3 | 0.00000000513834 |
| Erythranthe guttata | scaffold_8 | 4 | CH_egut_277 | 2 | 2 | 0.0000728147 |
| Gossypium hirsutum | D02 | 4 | CH_ghi_421 | 2 | 3 | 0.0000801047 |
| Nelumbo nucifera | chr1 | 4 | CH_nnu_52 | 3 | 4 | 0.00000000348038 |
| Nicotiana tabacum | Nitab4.5_0000512 | 4 | CH_nta_133 | 2 | 2 | 0.000658364 |
| Nicotiana tabacum | Nitab4.5_0000638 | 4 | CH_nta_134 | 2 | 2 | 0.000658364 |
| Olea europaea | chr13 | 4 | CH_oeu_220 | 2 | 2 | 0.000160137 |
| Petunia axillaris | Peaxi162Scf00132 | 4 | CH_pax_51 | 3 | 3 | 0.00000000742514 |
| Quercus lobata | 8 | 4 | CH_qlo_399 | 3 | 5 | 0.0000000399821 |
| Rosa chinensis | RcHm_v2.0_Chr2 | 4 | CH_rch_575 | 2 | 3 | 0.000119593 |
| Salix brachista | GWHAAZH00000013 | 4 | CH_sbr_235 | 2 | 2 | 0.000063014 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_258 | 4 | 4 | 0.000000000000346852 |
| Sapria himalayana | scaffold10_15062905 | 4 | CH_shi_27 | 4 | 9 | 0.0000000000706658 |
| Trochodendron aralioides | group9 | 4 | CH_tar_82 | 3 | 3 | 0.00000000540676 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_218 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |