Functional clusters

Information

  • Type Gene Ontology
  • Description potassium ion transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aethionema arabicum LG-9 3 CH_aar_28 7 13 0.00000000000208553
Aethionema arabicum LG-7 3 CH_aar_38 8 30 0.0000000000111049
Acer truncatum chr11 3 CH_acertr_25 7 9 0.0000000000000111942
Arabidopsis lyrata scaffold_9 3 CH_aly_226 3 4 0.000106055
Aquilegia oxysepala CHR04 3 CH_aox_167 3 3 0.0000631473
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 3 CH_arhy_473 3 3 0.0000673797
Amborella trichopoda AmTr_v1.0_scaffold00057 3 CH_atr_41 6 7 0.00000000000303516
Camellia sinensis var. sinensis Chr1 3 CH_camsi_572 5 35 0.000125445
Capsicum annuum PGAv.1.6.scaffold339 3 CH_can_254 3 3 0.00002072
Corylus avellana 2 3 CH_cav_241 3 3 0.0000685132
Corylus avellana 2 3 CH_cav_47 6 8 0.00000000000387332
Coffea canephora chr2 3 CH_ccan_155 3 8 0.00000831079
Coffea canephora chr5 3 CH_ccan_178 4 82 0.0000134756
Coffea canephora chr11 3 CH_ccan_298 3 22 0.000228387
Ceratophyllum demersum 4 3 CH_cde_52 4 6 0.000000905552
Carpinus fangiana Cfa01 3 CH_cfa_203 3 3 0.000046943
Cardamine hirsuta Chr7 3 CH_chi_199 3 3 0.0000355468
Carya illinoinensis Chr08 3 CH_cil_358 3 3 0.0000874821
Carya illinoinensis Chr08 3 CH_cil_359 3 3 0.0000874821
Carya illinoinensis Chr09 3 CH_cil_360 3 3 0.0000874821
Carya illinoinensis Chr05 3 CH_cil_446 3 4 0.000349568
Cucumis melo chr01 3 CH_cme_99 4 5 0.000000121967
Carica papaya supercontig_53 3 CH_cpa_246 3 5 0.000395826
Cucumis sativus L. chr7 3 CH_csa_196 3 4 0.000108626
Davidia involucrata GWHABJS00000018 3 CH_din_108 4 5 0.0000000767419
Durio zibethinus NW_019167893.1 3 CH_dzi_230 3 4 0.000137309
Eucalyptus grandis Chr08 3 CH_egr_436 4 4 0.0000000742316
Eucalyptus grandis Chr08 3 CH_egr_699 3 3 0.0000634123
Fragaria vesca Fvb3 3 CH_fve_228 3 3 0.0000311513
Fragaria vesca Fvb6 3 CH_fve_229 3 3 0.0000311513
Gossypium hirsutum A01 3 CH_ghi_558 3 4 0.000351196
Lupinus albus Lalb_Chr05 3 CH_lal_39 6 6 0.000000000000205726
Lonicera japonica GWHAAZE00000001 3 CH_lonja_217 4 4 0.0000000588933
Magnolia biondii Chr19 3 CH_mbi_505 4 26 0.000207545
Malus domestica Chr10 3 CH_mdo_202 4 4 0.000000085377
Malus domestica Chr13 3 CH_mdo_282 4 6 0.00000127839
Malus domestica Chr16 3 CH_mdo_444 3 3 0.0000776327
Medicago truncatula chr2 3 CH_mtr_447 3 3 0.000019675
Nelumbo nucifera chr1 3 CH_nnu_207 4 19 0.000117502
Nelumbo nucifera chr4 3 CH_nnu_214 3 4 0.000137449
Nelumbo nucifera chr1 3 CH_nnu_215 3 4 0.000137449
Petunia axillaris Peaxi162Scf00067 3 CH_pax_176 3 4 0.0000368287
Prunus persica Pp04 3 CH_ppe_351 3 4 0.000135451
Pisum sativum chr1LG6 3 CH_psa_184 3 3 0.000020245
Quercus lobata 12 3 CH_qlo_24 13 20 1.32589e-28
Rosa chinensis RcHm_v2.0_Chr5 3 CH_rch_139 5 5 0.00000000000527152
Salix brachista GWHAAZH00000010 3 CH_sbr_251 3 3 0.000073507
Selenicereus undatus Scaffold_19641 3 CH_sun_75 3 3 0.0000160308
Trochodendron aralioides group11 3 CH_tar_374 3 4 0.000306588
Trochodendron aralioides group6 3 CH_tar_375 3 4 0.000306588
Theobroma cacao Chromosome_1 3 CH_tca_241 3 3 0.0000361674
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_127 4 5 0.000000708188
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_376 3 5 0.000922623
Vigna mungo CM024069.1 3 CH_vmu_298 3 6 0.000619888
Vanilla planifolia CM028158.1 3 CH_vpl_104 4 5 0.00000117592
Vitis vinifera chr7 3 CH_vvi_79 6 9 0.0000000000156534
Zea mays 1 3 CH_zma_106 4 4 0.000000254827
Aethionema arabicum LG-9 4 CH_aar_28 7 13 0.00000000000208553
Aethionema arabicum LG-7 4 CH_aar_38 8 30 0.0000000000111049
Acer truncatum chr11 4 CH_acertr_25 7 9 0.0000000000000111942
Arabidopsis lyrata scaffold_9 4 CH_aly_226 3 4 0.000106055
Aquilegia oxysepala CHR04 4 CH_aox_167 3 3 0.0000631473
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 4 CH_arhy_473 3 3 0.0000673797
Amborella trichopoda AmTr_v1.0_scaffold00057 4 CH_atr_41 6 7 0.00000000000303516
Camellia sinensis var. sinensis Chr1 4 CH_camsi_572 5 35 0.000125445
Capsicum annuum PGAv.1.6.scaffold339 4 CH_can_254 3 3 0.00002072
Corylus avellana 2 4 CH_cav_241 3 3 0.0000685132
Corylus avellana 2 4 CH_cav_47 6 8 0.00000000000387332
Coffea canephora chr2 4 CH_ccan_155 3 8 0.00000831079
Coffea canephora chr5 4 CH_ccan_178 4 82 0.0000134756
Coffea canephora chr11 4 CH_ccan_298 3 22 0.000228387
Ceratophyllum demersum 4 4 CH_cde_52 4 6 0.000000905552
Carpinus fangiana Cfa01 4 CH_cfa_203 3 3 0.000046943
Cardamine hirsuta Chr7 4 CH_chi_199 3 3 0.0000355468
Carya illinoinensis Chr08 4 CH_cil_358 3 3 0.0000874821
Carya illinoinensis Chr08 4 CH_cil_359 3 3 0.0000874821
Carya illinoinensis Chr09 4 CH_cil_360 3 3 0.0000874821
Carya illinoinensis Chr05 4 CH_cil_446 3 4 0.000349568
Cucumis melo chr01 4 CH_cme_99 4 5 0.000000121967
Carica papaya supercontig_53 4 CH_cpa_246 3 5 0.000395826
Cucumis sativus L. chr7 4 CH_csa_196 3 4 0.000108626
Davidia involucrata GWHABJS00000018 4 CH_din_108 4 5 0.0000000767419
Durio zibethinus NW_019167893.1 4 CH_dzi_230 3 4 0.000137309
Eucalyptus grandis Chr08 4 CH_egr_436 4 4 0.0000000742316
Eucalyptus grandis Chr08 4 CH_egr_699 3 3 0.0000634123
Fragaria vesca Fvb3 4 CH_fve_228 3 3 0.0000311513
Fragaria vesca Fvb6 4 CH_fve_229 3 3 0.0000311513
Gossypium hirsutum A01 4 CH_ghi_558 3 4 0.000351196
Lupinus albus Lalb_Chr05 4 CH_lal_39 6 6 0.000000000000205726
Lonicera japonica GWHAAZE00000001 4 CH_lonja_217 4 4 0.0000000588933
Magnolia biondii Chr19 4 CH_mbi_505 4 26 0.000207545
Malus domestica Chr10 4 CH_mdo_202 4 4 0.000000085377
Malus domestica Chr13 4 CH_mdo_282 4 6 0.00000127839
Malus domestica Chr16 4 CH_mdo_444 3 3 0.0000776327
Medicago truncatula chr2 4 CH_mtr_447 3 3 0.000019675
Nelumbo nucifera chr1 4 CH_nnu_207 4 19 0.000117502
Nelumbo nucifera chr4 4 CH_nnu_214 3 4 0.000137449
Nelumbo nucifera chr1 4 CH_nnu_215 3 4 0.000137449
Petunia axillaris Peaxi162Scf00067 4 CH_pax_176 3 4 0.0000368287
Prunus persica Pp04 4 CH_ppe_351 3 4 0.000135451
Pisum sativum chr1LG6 4 CH_psa_184 3 3 0.000020245
Quercus lobata 12 4 CH_qlo_24 13 20 1.32589e-28
Rosa chinensis RcHm_v2.0_Chr5 4 CH_rch_139 5 5 0.00000000000527152
Salix brachista GWHAAZH00000010 4 CH_sbr_251 3 3 0.000073507
Selenicereus undatus Scaffold_19641 4 CH_sun_75 3 3 0.0000160308
Trochodendron aralioides group11 4 CH_tar_374 3 4 0.000306588
Trochodendron aralioides group6 4 CH_tar_375 3 4 0.000306588
Theobroma cacao Chromosome_1 4 CH_tca_241 3 3 0.0000361674
Vaccinium macrocarpon chr9_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_127 4 5 0.000000708188
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_376 3 5 0.000922623
Vigna mungo CM024069.1 4 CH_vmu_298 3 6 0.000619888
Vanilla planifolia CM028158.1 4 CH_vpl_104 4 5 0.00000117592
Vitis vinifera chr7 4 CH_vvi_79 6 9 0.0000000000156534
Zea mays 1 4 CH_zma_106 4 4 0.000000254827

Available child term results

Ontology identifier Description Number of clusters
GO:0005249 voltage-gated potassium channel activity 16
GO:0005267 potassium channel activity 20
GO:0008273 calcium, potassium:sodium antiporter activity 2
GO:0008511 sodium:potassium:chloride symporter activity 4
GO:0009674 potassium:sodium symporter activity 14
GO:0015269 calcium-activated potassium channel activity 30
GO:0015271 outward rectifier potassium channel activity 4
GO:0015386 potassium:proton antiporter activity 10
GO:0022821 potassium ion antiporter activity 20

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001