Functional clusters
Information
- Type Gene Ontology
- Description potassium ion transmembrane transporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Aethionema arabicum | LG-9 | 3 | CH_aar_28 | 7 | 13 | 0.00000000000208553 |
Aethionema arabicum | LG-7 | 3 | CH_aar_38 | 8 | 30 | 0.0000000000111049 |
Acer truncatum | chr11 | 3 | CH_acertr_25 | 7 | 9 | 0.0000000000000111942 |
Arabidopsis lyrata | scaffold_9 | 3 | CH_aly_226 | 3 | 4 | 0.000106055 |
Aquilegia oxysepala | CHR04 | 3 | CH_aox_167 | 3 | 3 | 0.0000631473 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_473 | 3 | 3 | 0.0000673797 |
Amborella trichopoda | AmTr_v1.0_scaffold00057 | 3 | CH_atr_41 | 6 | 7 | 0.00000000000303516 |
Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_572 | 5 | 35 | 0.000125445 |
Capsicum annuum | PGAv.1.6.scaffold339 | 3 | CH_can_254 | 3 | 3 | 0.00002072 |
Corylus avellana | 2 | 3 | CH_cav_241 | 3 | 3 | 0.0000685132 |
Corylus avellana | 2 | 3 | CH_cav_47 | 6 | 8 | 0.00000000000387332 |
Coffea canephora | chr2 | 3 | CH_ccan_155 | 3 | 8 | 0.00000831079 |
Coffea canephora | chr5 | 3 | CH_ccan_178 | 4 | 82 | 0.0000134756 |
Coffea canephora | chr11 | 3 | CH_ccan_298 | 3 | 22 | 0.000228387 |
Ceratophyllum demersum | 4 | 3 | CH_cde_52 | 4 | 6 | 0.000000905552 |
Carpinus fangiana | Cfa01 | 3 | CH_cfa_203 | 3 | 3 | 0.000046943 |
Cardamine hirsuta | Chr7 | 3 | CH_chi_199 | 3 | 3 | 0.0000355468 |
Carya illinoinensis | Chr08 | 3 | CH_cil_358 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr08 | 3 | CH_cil_359 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr09 | 3 | CH_cil_360 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr05 | 3 | CH_cil_446 | 3 | 4 | 0.000349568 |
Cucumis melo | chr01 | 3 | CH_cme_99 | 4 | 5 | 0.000000121967 |
Carica papaya | supercontig_53 | 3 | CH_cpa_246 | 3 | 5 | 0.000395826 |
Cucumis sativus L. | chr7 | 3 | CH_csa_196 | 3 | 4 | 0.000108626 |
Davidia involucrata | GWHABJS00000018 | 3 | CH_din_108 | 4 | 5 | 0.0000000767419 |
Durio zibethinus | NW_019167893.1 | 3 | CH_dzi_230 | 3 | 4 | 0.000137309 |
Eucalyptus grandis | Chr08 | 3 | CH_egr_436 | 4 | 4 | 0.0000000742316 |
Eucalyptus grandis | Chr08 | 3 | CH_egr_699 | 3 | 3 | 0.0000634123 |
Fragaria vesca | Fvb3 | 3 | CH_fve_228 | 3 | 3 | 0.0000311513 |
Fragaria vesca | Fvb6 | 3 | CH_fve_229 | 3 | 3 | 0.0000311513 |
Gossypium hirsutum | A01 | 3 | CH_ghi_558 | 3 | 4 | 0.000351196 |
Lupinus albus | Lalb_Chr05 | 3 | CH_lal_39 | 6 | 6 | 0.000000000000205726 |
Lonicera japonica | GWHAAZE00000001 | 3 | CH_lonja_217 | 4 | 4 | 0.0000000588933 |
Magnolia biondii | Chr19 | 3 | CH_mbi_505 | 4 | 26 | 0.000207545 |
Malus domestica | Chr10 | 3 | CH_mdo_202 | 4 | 4 | 0.000000085377 |
Malus domestica | Chr13 | 3 | CH_mdo_282 | 4 | 6 | 0.00000127839 |
Malus domestica | Chr16 | 3 | CH_mdo_444 | 3 | 3 | 0.0000776327 |
Medicago truncatula | chr2 | 3 | CH_mtr_447 | 3 | 3 | 0.000019675 |
Nelumbo nucifera | chr1 | 3 | CH_nnu_207 | 4 | 19 | 0.000117502 |
Nelumbo nucifera | chr4 | 3 | CH_nnu_214 | 3 | 4 | 0.000137449 |
Nelumbo nucifera | chr1 | 3 | CH_nnu_215 | 3 | 4 | 0.000137449 |
Petunia axillaris | Peaxi162Scf00067 | 3 | CH_pax_176 | 3 | 4 | 0.0000368287 |
Prunus persica | Pp04 | 3 | CH_ppe_351 | 3 | 4 | 0.000135451 |
Pisum sativum | chr1LG6 | 3 | CH_psa_184 | 3 | 3 | 0.000020245 |
Quercus lobata | 12 | 3 | CH_qlo_24 | 13 | 20 | 1.32589e-28 |
Rosa chinensis | RcHm_v2.0_Chr5 | 3 | CH_rch_139 | 5 | 5 | 0.00000000000527152 |
Salix brachista | GWHAAZH00000010 | 3 | CH_sbr_251 | 3 | 3 | 0.000073507 |
Selenicereus undatus | Scaffold_19641 | 3 | CH_sun_75 | 3 | 3 | 0.0000160308 |
Trochodendron aralioides | group11 | 3 | CH_tar_374 | 3 | 4 | 0.000306588 |
Trochodendron aralioides | group6 | 3 | CH_tar_375 | 3 | 4 | 0.000306588 |
Theobroma cacao | Chromosome_1 | 3 | CH_tca_241 | 3 | 3 | 0.0000361674 |
Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_127 | 4 | 5 | 0.000000708188 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_376 | 3 | 5 | 0.000922623 |
Vigna mungo | CM024069.1 | 3 | CH_vmu_298 | 3 | 6 | 0.000619888 |
Vanilla planifolia | CM028158.1 | 3 | CH_vpl_104 | 4 | 5 | 0.00000117592 |
Vitis vinifera | chr7 | 3 | CH_vvi_79 | 6 | 9 | 0.0000000000156534 |
Zea mays | 1 | 3 | CH_zma_106 | 4 | 4 | 0.000000254827 |
Aethionema arabicum | LG-9 | 4 | CH_aar_28 | 7 | 13 | 0.00000000000208553 |
Aethionema arabicum | LG-7 | 4 | CH_aar_38 | 8 | 30 | 0.0000000000111049 |
Acer truncatum | chr11 | 4 | CH_acertr_25 | 7 | 9 | 0.0000000000000111942 |
Arabidopsis lyrata | scaffold_9 | 4 | CH_aly_226 | 3 | 4 | 0.000106055 |
Aquilegia oxysepala | CHR04 | 4 | CH_aox_167 | 3 | 3 | 0.0000631473 |
Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_473 | 3 | 3 | 0.0000673797 |
Amborella trichopoda | AmTr_v1.0_scaffold00057 | 4 | CH_atr_41 | 6 | 7 | 0.00000000000303516 |
Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_572 | 5 | 35 | 0.000125445 |
Capsicum annuum | PGAv.1.6.scaffold339 | 4 | CH_can_254 | 3 | 3 | 0.00002072 |
Corylus avellana | 2 | 4 | CH_cav_241 | 3 | 3 | 0.0000685132 |
Corylus avellana | 2 | 4 | CH_cav_47 | 6 | 8 | 0.00000000000387332 |
Coffea canephora | chr2 | 4 | CH_ccan_155 | 3 | 8 | 0.00000831079 |
Coffea canephora | chr5 | 4 | CH_ccan_178 | 4 | 82 | 0.0000134756 |
Coffea canephora | chr11 | 4 | CH_ccan_298 | 3 | 22 | 0.000228387 |
Ceratophyllum demersum | 4 | 4 | CH_cde_52 | 4 | 6 | 0.000000905552 |
Carpinus fangiana | Cfa01 | 4 | CH_cfa_203 | 3 | 3 | 0.000046943 |
Cardamine hirsuta | Chr7 | 4 | CH_chi_199 | 3 | 3 | 0.0000355468 |
Carya illinoinensis | Chr08 | 4 | CH_cil_358 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr08 | 4 | CH_cil_359 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr09 | 4 | CH_cil_360 | 3 | 3 | 0.0000874821 |
Carya illinoinensis | Chr05 | 4 | CH_cil_446 | 3 | 4 | 0.000349568 |
Cucumis melo | chr01 | 4 | CH_cme_99 | 4 | 5 | 0.000000121967 |
Carica papaya | supercontig_53 | 4 | CH_cpa_246 | 3 | 5 | 0.000395826 |
Cucumis sativus L. | chr7 | 4 | CH_csa_196 | 3 | 4 | 0.000108626 |
Davidia involucrata | GWHABJS00000018 | 4 | CH_din_108 | 4 | 5 | 0.0000000767419 |
Durio zibethinus | NW_019167893.1 | 4 | CH_dzi_230 | 3 | 4 | 0.000137309 |
Eucalyptus grandis | Chr08 | 4 | CH_egr_436 | 4 | 4 | 0.0000000742316 |
Eucalyptus grandis | Chr08 | 4 | CH_egr_699 | 3 | 3 | 0.0000634123 |
Fragaria vesca | Fvb3 | 4 | CH_fve_228 | 3 | 3 | 0.0000311513 |
Fragaria vesca | Fvb6 | 4 | CH_fve_229 | 3 | 3 | 0.0000311513 |
Gossypium hirsutum | A01 | 4 | CH_ghi_558 | 3 | 4 | 0.000351196 |
Lupinus albus | Lalb_Chr05 | 4 | CH_lal_39 | 6 | 6 | 0.000000000000205726 |
Lonicera japonica | GWHAAZE00000001 | 4 | CH_lonja_217 | 4 | 4 | 0.0000000588933 |
Magnolia biondii | Chr19 | 4 | CH_mbi_505 | 4 | 26 | 0.000207545 |
Malus domestica | Chr10 | 4 | CH_mdo_202 | 4 | 4 | 0.000000085377 |
Malus domestica | Chr13 | 4 | CH_mdo_282 | 4 | 6 | 0.00000127839 |
Malus domestica | Chr16 | 4 | CH_mdo_444 | 3 | 3 | 0.0000776327 |
Medicago truncatula | chr2 | 4 | CH_mtr_447 | 3 | 3 | 0.000019675 |
Nelumbo nucifera | chr1 | 4 | CH_nnu_207 | 4 | 19 | 0.000117502 |
Nelumbo nucifera | chr4 | 4 | CH_nnu_214 | 3 | 4 | 0.000137449 |
Nelumbo nucifera | chr1 | 4 | CH_nnu_215 | 3 | 4 | 0.000137449 |
Petunia axillaris | Peaxi162Scf00067 | 4 | CH_pax_176 | 3 | 4 | 0.0000368287 |
Prunus persica | Pp04 | 4 | CH_ppe_351 | 3 | 4 | 0.000135451 |
Pisum sativum | chr1LG6 | 4 | CH_psa_184 | 3 | 3 | 0.000020245 |
Quercus lobata | 12 | 4 | CH_qlo_24 | 13 | 20 | 1.32589e-28 |
Rosa chinensis | RcHm_v2.0_Chr5 | 4 | CH_rch_139 | 5 | 5 | 0.00000000000527152 |
Salix brachista | GWHAAZH00000010 | 4 | CH_sbr_251 | 3 | 3 | 0.000073507 |
Selenicereus undatus | Scaffold_19641 | 4 | CH_sun_75 | 3 | 3 | 0.0000160308 |
Trochodendron aralioides | group11 | 4 | CH_tar_374 | 3 | 4 | 0.000306588 |
Trochodendron aralioides | group6 | 4 | CH_tar_375 | 3 | 4 | 0.000306588 |
Theobroma cacao | Chromosome_1 | 4 | CH_tca_241 | 3 | 3 | 0.0000361674 |
Vaccinium macrocarpon | chr9_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_127 | 4 | 5 | 0.000000708188 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_376 | 3 | 5 | 0.000922623 |
Vigna mungo | CM024069.1 | 4 | CH_vmu_298 | 3 | 6 | 0.000619888 |
Vanilla planifolia | CM028158.1 | 4 | CH_vpl_104 | 4 | 5 | 0.00000117592 |
Vitis vinifera | chr7 | 4 | CH_vvi_79 | 6 | 9 | 0.0000000000156534 |
Zea mays | 1 | 4 | CH_zma_106 | 4 | 4 | 0.000000254827 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0005249 | voltage-gated potassium channel activity | 16 |
GO:0005267 | potassium channel activity | 20 |
GO:0008273 | calcium, potassium:sodium antiporter activity | 2 |
GO:0008511 | sodium:potassium:chloride symporter activity | 4 |
GO:0009674 | potassium:sodium symporter activity | 14 |
GO:0015269 | calcium-activated potassium channel activity | 30 |
GO:0015271 | outward rectifier potassium channel activity | 4 |
GO:0015386 | potassium:proton antiporter activity | 10 |
GO:0022821 | potassium ion antiporter activity | 20 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |