Functional clusters
Information
- Type Gene Ontology
- Description calcium-activated potassium channel activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Carpinus fangiana | Cfa08 | 3 | CH_cfa_94 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr8 | 3 | CH_chi_220 | 2 | 2 | 0.0000691204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2080 | 3 | CH_cqu_29 | 7 | 30 | 6.52348e-17 |
| Daucus carota | DCARv2_Chr5 | 3 | CH_dca_372 | 2 | 5 | 0.000637714 |
| Fragaria x ananassa | Fvb3-3 | 3 | CH_fan_477 | 2 | 2 | 0.000518101 |
| Fragaria x ananassa | Fvb3-1 | 3 | CH_fan_65 | 4 | 9 | 0.000000000167605 |
| Fragaria vesca | Fvb3 | 3 | CH_fve_245 | 2 | 2 | 0.0000589102 |
| Helianthus annuus | HanXRQChr05 | 3 | CH_han_442 | 2 | 2 | 0.0000386429 |
| Lonicera japonica | GWHAAZE00000008 | 3 | CH_lonja_492 | 2 | 2 | 0.000359324 |
| Malus domestica | Chr03 | 3 | CH_mdo_470 | 2 | 2 | 0.000113763 |
| Prunus persica | Pp04 | 3 | CH_ppe_309 | 2 | 2 | 0.0000745962 |
| Papaver somniferum | NC_039365.1 | 3 | CH_pso_503 | 2 | 2 | 0.000135176 |
| Populus trichocarpa | Chr08 | 3 | CH_ptr_354 | 2 | 2 | 0.0001734 |
| Salix brachista | GWHAAZH00000008 | 3 | CH_sbr_279 | 2 | 2 | 0.000189042 |
| Vitis vinifera | chr19 | 3 | CH_vvi_145 | 3 | 3 | 0.000000086787 |
| Carpinus fangiana | Cfa08 | 4 | CH_cfa_94 | 3 | 3 | 0.0000000344157 |
| Cardamine hirsuta | Chr8 | 4 | CH_chi_220 | 2 | 2 | 0.0000691204 |
| Chenopodium quinoa | C_Quinoa_Scaffold_2080 | 4 | CH_cqu_29 | 7 | 30 | 6.52348e-17 |
| Daucus carota | DCARv2_Chr5 | 4 | CH_dca_372 | 2 | 5 | 0.000637714 |
| Fragaria x ananassa | Fvb3-3 | 4 | CH_fan_477 | 2 | 2 | 0.000518101 |
| Fragaria x ananassa | Fvb3-1 | 4 | CH_fan_65 | 4 | 9 | 0.000000000167605 |
| Fragaria vesca | Fvb3 | 4 | CH_fve_245 | 2 | 2 | 0.0000589102 |
| Helianthus annuus | HanXRQChr05 | 4 | CH_han_442 | 2 | 2 | 0.0000386429 |
| Lonicera japonica | GWHAAZE00000008 | 4 | CH_lonja_492 | 2 | 2 | 0.000359324 |
| Malus domestica | Chr03 | 4 | CH_mdo_470 | 2 | 2 | 0.000113763 |
| Prunus persica | Pp04 | 4 | CH_ppe_309 | 2 | 2 | 0.0000745962 |
| Papaver somniferum | NC_039365.1 | 4 | CH_pso_503 | 2 | 2 | 0.000135176 |
| Populus trichocarpa | Chr08 | 4 | CH_ptr_354 | 2 | 2 | 0.0001734 |
| Salix brachista | GWHAAZH00000008 | 4 | CH_sbr_279 | 2 | 2 | 0.000189042 |
| Vitis vinifera | chr19 | 4 | CH_vvi_145 | 3 | 3 | 0.000000086787 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |