Functional clusters
Information
- Type Gene Ontology
- Description calcium:sodium antiporter activity
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Acer truncatum | chr2 | 3 | CH_acertr_102 | 4 | 19 | 0.0000000203526 |
Actinidia chinensis | Lachesis_group19 | 3 | CH_ach_199 | 2 | 2 | 0.000325928 |
Arabidopsis thaliana | Chr5 | 3 | CH_ath_507 | 2 | 2 | 0.000286492 |
Camellia sinensis var. sinensis | Chr5 | 3 | CH_camsi_723 | 2 | 3 | 0.000412677 |
Carpinus fangiana | Cfa08 | 3 | CH_cfa_251 | 2 | 3 | 0.000227195 |
Carya illinoinensis | Chr11 | 3 | CH_cil_33 | 7 | 11 | 1.17919e-20 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 3 | CH_eca_317 | 2 | 2 | 0.000134617 |
Fragaria x ananassa | Fvb3-3 | 3 | CH_fan_545 | 2 | 3 | 0.000832634 |
Fragaria vesca | Fvb3 | 3 | CH_fve_246 | 2 | 2 | 0.0000589102 |
Malus domestica | Chr03 | 3 | CH_mdo_471 | 2 | 2 | 0.000113763 |
Marchantia polymorpha | scaffold_12 | 3 | CH_mpo_45 | 3 | 3 | 0.000000365945 |
Physcomitrium patens | Chr13 | 3 | CH_ppa_165 | 2 | 2 | 0.000367636 |
Prunus persica | Pp04 | 3 | CH_ppe_310 | 2 | 2 | 0.0000745962 |
Quercus lobata | 8 | 3 | CH_qlo_155 | 5 | 7 | 0.00000000000000671474 |
Rhododendron simsii | chr06 | 3 | CH_rsi_221 | 3 | 5 | 0.000000249833 |
Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_280 | 2 | 2 | 0.000278772 |
Vitis vinifera | chr19 | 3 | CH_vvi_311 | 2 | 3 | 0.00022818 |
Acer truncatum | chr2 | 4 | CH_acertr_102 | 4 | 19 | 0.0000000203526 |
Actinidia chinensis | Lachesis_group19 | 4 | CH_ach_199 | 2 | 2 | 0.000325928 |
Arabidopsis thaliana | Chr5 | 4 | CH_ath_507 | 2 | 2 | 0.000286492 |
Camellia sinensis var. sinensis | Chr5 | 4 | CH_camsi_723 | 2 | 3 | 0.000412677 |
Carpinus fangiana | Cfa08 | 4 | CH_cfa_251 | 2 | 3 | 0.000227195 |
Carya illinoinensis | Chr11 | 4 | CH_cil_33 | 7 | 11 | 1.17919e-20 |
Erigeron canadensis | Conyza_canadensis_scaffold:4 | 4 | CH_eca_317 | 2 | 2 | 0.000134617 |
Fragaria x ananassa | Fvb3-3 | 4 | CH_fan_545 | 2 | 3 | 0.000832634 |
Fragaria vesca | Fvb3 | 4 | CH_fve_246 | 2 | 2 | 0.0000589102 |
Malus domestica | Chr03 | 4 | CH_mdo_471 | 2 | 2 | 0.000113763 |
Marchantia polymorpha | scaffold_12 | 4 | CH_mpo_45 | 3 | 3 | 0.000000365945 |
Physcomitrium patens | Chr13 | 4 | CH_ppa_165 | 2 | 2 | 0.000367636 |
Prunus persica | Pp04 | 4 | CH_ppe_310 | 2 | 2 | 0.0000745962 |
Quercus lobata | 8 | 4 | CH_qlo_155 | 5 | 7 | 0.00000000000000671474 |
Rhododendron simsii | chr06 | 4 | CH_rsi_221 | 3 | 5 | 0.000000249833 |
Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_280 | 2 | 2 | 0.000278772 |
Vitis vinifera | chr19 | 4 | CH_vvi_311 | 2 | 3 | 0.00022818 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0008273 | calcium, potassium:sodium antiporter activity | 2 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |