Functional clusters

Information

  • Type Gene Ontology
  • Description tripeptide transmembrane transporter activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr13 3 CH_acertr_184 3 3 0.00000123008
Arabidopsis lyrata scaffold_1 3 CH_aly_139 3 3 0.00000365965
Arabidopsis lyrata scaffold_2 3 CH_aly_75 4 6 0.0000000235365
Arabidopsis thaliana Chr1 3 CH_ath_374 3 8 0.0000468448
Arabidopsis thaliana Chr1 3 CH_ath_99 4 6 0.0000000025177
Brassica carinata ChrB03 3 CH_bca_99 5 8 0.000000000120085
Brassica napus A07 3 CH_bna_135 4 4 0.00000000519412
Brassica oleracea C6 3 CH_bol_97 4 6 0.000000032156
Carpinus fangiana Cfa06 3 CH_cfa_111 4 6 0.000000116877
Carpinus fangiana Cfa05 3 CH_cfa_15 9 16 5.14814e-21
Cardamine hirsuta Chr2 3 CH_chi_107 4 7 0.0000000472874
Cardamine hirsuta Chr1 3 CH_chi_198 3 5 0.000032586
Capsella rubella scaffold_1 3 CH_cru_169 3 3 0.00000545299
Capsella rubella scaffold_2 3 CH_cru_205 3 5 0.000054484
Capsella rubella scaffold_5 3 CH_cru_343 4 54 0.000864468
Durio zibethinus NW_019168004.1 3 CH_dzi_73 4 4 0.00000000115785
Erythranthe guttata scaffold_3 3 CH_egut_188 3 3 0.00000095439
Helianthus annuus HanXRQChr02 3 CH_han_224 4 8 0.0000000288169
Hydrangea macrophylla Hma1.2p1_0112F.1 3 CH_hma_293 2 2 0.000666519
Lotus japonicus chr1 3 CH_lja_147 3 3 0.00000219371
Manihot esculenta Chromosome18 3 CH_mes_161 4 7 0.0000000730805
Medicago truncatula chr7 3 CH_mtr_112 6 16 0.00000000000114171
Medicago truncatula chr4 3 CH_mtr_222 4 5 0.00000000622506
Medicago truncatula chr1 3 CH_mtr_534 3 7 0.000117733
Nelumbo nucifera chr3 3 CH_nnu_155 3 4 0.0000113566
Nelumbo nucifera chr1 3 CH_nnu_60 4 5 0.00000000512865
Olea europaea chr20 3 CH_oeu_34 4 6 0.000000000862205
Papaver somniferum NC_039360.1 3 CH_pso_177 5 16 0.00000000234131
Papaver somniferum NC_039365.1 3 CH_pso_38 8 21 3.41736e-18
Populus trichocarpa Chr13 3 CH_ptr_113 5 7 0.0000000000357482
Populus trichocarpa Chr19 3 CH_ptr_266 3 3 0.0000066652
Quercus lobata 1 3 CH_qlo_625 3 3 0.00000919636
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_18 11 24 3.47329e-28
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_385 3 3 0.00000317059
Rhododendron simsii chr12 3 CH_rsi_135 4 4 0.000000000399087
Rhododendron simsii chr04 3 CH_rsi_307 3 5 0.0000137355
Sequoiadendron giganteum chr9 3 CH_sgi_757 4 11 0.00000200216
Tarenaya hassleriana NW_010969032.1 3 CH_tha_65 3 3 0.00000161
Acer truncatum chr13 4 CH_acertr_184 3 3 0.00000123008
Arabidopsis lyrata scaffold_1 4 CH_aly_139 3 3 0.00000365965
Arabidopsis lyrata scaffold_2 4 CH_aly_75 4 6 0.0000000235365
Arabidopsis thaliana Chr1 4 CH_ath_374 3 8 0.0000468448
Arabidopsis thaliana Chr1 4 CH_ath_99 4 6 0.0000000025177
Brassica carinata ChrB03 4 CH_bca_99 5 8 0.000000000120085
Brassica napus A07 4 CH_bna_135 4 4 0.00000000519412
Brassica oleracea C6 4 CH_bol_97 4 6 0.000000032156
Carpinus fangiana Cfa06 4 CH_cfa_111 4 6 0.000000116877
Carpinus fangiana Cfa05 4 CH_cfa_15 9 16 5.14814e-21
Cardamine hirsuta Chr2 4 CH_chi_107 4 7 0.0000000472874
Cardamine hirsuta Chr1 4 CH_chi_198 3 5 0.000032586
Capsella rubella scaffold_1 4 CH_cru_169 3 3 0.00000545299
Capsella rubella scaffold_2 4 CH_cru_205 3 5 0.000054484
Capsella rubella scaffold_5 4 CH_cru_343 4 54 0.000864468
Durio zibethinus NW_019168004.1 4 CH_dzi_73 4 4 0.00000000115785
Erythranthe guttata scaffold_3 4 CH_egut_188 3 3 0.00000095439
Helianthus annuus HanXRQChr02 4 CH_han_224 4 8 0.0000000288169
Hydrangea macrophylla Hma1.2p1_0112F.1 4 CH_hma_293 2 2 0.000666519
Lotus japonicus chr1 4 CH_lja_147 3 3 0.00000219371
Manihot esculenta Chromosome18 4 CH_mes_161 4 7 0.0000000730805
Medicago truncatula chr7 4 CH_mtr_112 6 16 0.00000000000114171
Medicago truncatula chr4 4 CH_mtr_222 4 5 0.00000000622506
Medicago truncatula chr1 4 CH_mtr_534 3 7 0.000117733
Nelumbo nucifera chr3 4 CH_nnu_155 3 4 0.0000113566
Nelumbo nucifera chr1 4 CH_nnu_60 4 5 0.00000000512865
Olea europaea chr20 4 CH_oeu_34 4 6 0.000000000862205
Papaver somniferum NC_039360.1 4 CH_pso_177 5 16 0.00000000234131
Papaver somniferum NC_039365.1 4 CH_pso_38 8 21 3.41736e-18
Populus trichocarpa Chr13 4 CH_ptr_113 5 7 0.0000000000357482
Populus trichocarpa Chr19 4 CH_ptr_266 3 3 0.0000066652
Quercus lobata 1 4 CH_qlo_625 3 3 0.00000919636
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_18 11 24 3.47329e-28
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_385 3 3 0.00000317059
Rhododendron simsii chr12 4 CH_rsi_135 4 4 0.000000000399087
Rhododendron simsii chr04 4 CH_rsi_307 3 5 0.0000137355
Sequoiadendron giganteum chr9 4 CH_sgi_757 4 11 0.00000200216
Tarenaya hassleriana NW_010969032.1 4 CH_tha_65 3 3 0.00000161

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001