Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Anthoceros agrestis Sc2ySwM_117 1 CH_aag_121 7 19 0.000201602
Allium sativum chr7_2 1 CH_asa_66 14 23 0.00000000000125062
Eragrostis curvula 5 1 CH_ecu_187 12 23 0.00000000293914
Hordeum vulgare chr2H 1 CH_hvu_223 10 31 0.0000083317
Micromonas commoda Chr_03 1 CH_mco_5 5 6 0.000151855
Miscanthus sinensis Chr01 1 CH_msi_242 11 29 0.00000395729
Sequoiadendron giganteum chr1 1 CH_sgi_607 10 22 0.00000144486
Saccharum spontaneum Chr1C 1 CH_ssp_362 14 41 0.00000123005
Zea mays B73 1 1 CH_zma_117 9 18 0.00000625496
Anthoceros agrestis Sc2ySwM_117 2 CH_aag_121 7 19 0.000201602
Allium sativum chr7_2 2 CH_asa_66 14 23 0.00000000000125062
Eragrostis curvula 5 2 CH_ecu_187 12 23 0.00000000293914
Hordeum vulgare chr2H 2 CH_hvu_223 10 31 0.0000083317
Micromonas commoda Chr_03 2 CH_mco_5 5 6 0.000151855
Miscanthus sinensis Chr01 2 CH_msi_242 11 29 0.00000395729
Sequoiadendron giganteum chr1 2 CH_sgi_607 10 22 0.00000144486
Saccharum spontaneum Chr1C 2 CH_ssp_362 14 41 0.00000123005
Zea mays B73 1 2 CH_zma_117 9 18 0.00000625496

Available child term results

Ontology identifier Description Number of clusters
24.2.1 Solute transport.carrier-mediated transport.DMT superfamily 6
24.2.1.1 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group 4
24.2.1.1.1 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.phosphometabolite transporter (TPT/PPT/GPT/XPT) 2
24.2.1.1.11 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (UUAT) 6
24.2.1.1.4 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (GONST1/2/3/4) 2
24.2.1.1.5 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (UTR1/5) 4
24.2.1.1.7 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (CSTLP) 2
24.2.1.1.9 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (ROCK) 2
24.2.1.2 Solute transport.carrier-mediated transport.DMT superfamily.nucleobase cation transporter (UPS) 56
24.2.1.3 Solute transport.carrier-mediated transport.DMT superfamily.glutathione transporter (CLT) 4
24.2.1.4 Solute transport.carrier-mediated transport.DMT superfamily.solute transporter (NIPA) 4
24.2.1.5 Solute transport.carrier-mediated transport.DMT superfamily.solute transporter (UmamiT) 252
24.2.1.6 Solute transport.carrier-mediated transport.DMT superfamily.organic cation transporter (PUP) 222
24.2.1.7 Solute transport.carrier-mediated transport.DMT superfamily.solute transporter (TPPT) 26
24.2.10 Solute transport.carrier-mediated transport.OPT family 4
24.2.10.1 Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL) 56
24.2.10.2 Solute transport.carrier-mediated transport.OPT family.oligopeptide transporter (OPT) 62
24.2.11.1 Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP) 44
24.2.11.2 Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZIP13) 2
24.2.11.3 Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (IAR) 6
24.2.11.4 Solute transport.carrier-mediated transport.ZIP family.metal cation transporter (ZTP) 2
24.2.12.2 Solute transport.carrier-mediated transport.VIT family.metal cation transporter (MEB) 20
24.2.12.3 Solute transport.carrier-mediated transport.VIT family.iron cation transporter (VTL) 30
24.2.13 Solute transport.carrier-mediated transport.solute transporter (MTCC) 28
24.2.15 Solute transport.carrier-mediated transport.anion channel / anion:proton antiporter (CLC) 4
24.2.16 Solute transport.carrier-mediated transport.nucleoside transporter (ENT) 22
24.2.17 Solute transport.carrier-mediated transport.phosphate transporter (PHT2) 14
24.2.19 Solute transport.carrier-mediated transport.potassium/sodium cation transporter (HKT) 60
24.2.2 Solute transport.carrier-mediated transport.MFS superfamily 32
24.2.2.1.2 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (VGT) 4
24.2.2.1.3 Solute transport.carrier-mediated transport.MFS superfamily.SP family.inositol transporter (INT) 12
24.2.2.1.4 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (AZT) 8
24.2.2.1.5 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (ERD6) 54
24.2.2.1.6 Solute transport.carrier-mediated transport.MFS superfamily.SP family.monosaccharide transporter (STP) 120
24.2.2.1.7 Solute transport.carrier-mediated transport.MFS superfamily.SP family.polyol/monosaccharide transporter (PLT) 130
24.2.2.10 Solute transport.carrier-mediated transport.MFS superfamily.nitrate transporter (NRT2) 92
24.2.2.11 Solute transport.carrier-mediated transport.MFS superfamily.N-acetylglucosamine transporter (NGT) 32
24.2.2.12 Solute transport.carrier-mediated transport.MFS superfamily.organic anion transporter (OATP) 10
24.2.2.13 Solute transport.carrier-mediated transport.MFS superfamily.iron-regulated metal cation transporter (FPN) 10
24.2.2.14 Solute transport.carrier-mediated transport.MFS superfamily.ATP:ADP antiporter (NTT) 2
24.2.2.15 Solute transport.carrier-mediated transport.MFS superfamily.molybdate anion transporter (MOT2) 4
24.2.2.16 Solute transport.carrier-mediated transport.MFS superfamily.anion transporter (Fabaceae-N70) 48
24.2.2.17 Solute transport.carrier-mediated transport.MFS superfamily.solute transporter (UNE2) 104
24.2.2.2.1 Solute transport.carrier-mediated transport.MFS superfamily.DHA-1 family.metal chelator transporter (ZIF/TOM) 116
24.2.2.2.2 Solute transport.carrier-mediated transport.MFS superfamily.DHA-1 family.metal chelator transporter (TCR) 36
24.2.2.2.3 Solute transport.carrier-mediated transport.MFS superfamily.DHA-1 family.phosphate transporter (PHT5) 14
24.2.2.3.1 Solute transport.carrier-mediated transport.MFS superfamily.OCT family.nicotinate transporter (NiaP) 22
24.2.2.3.2 Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT) 50
24.2.2.4 Solute transport.carrier-mediated transport.MFS superfamily.sugar transporter (SUT/SUC) 16
24.2.2.5 Solute transport.carrier-mediated transport.MFS superfamily.small solute transporter (BT1) 10
24.2.2.6 Solute transport.carrier-mediated transport.MFS superfamily.phosphate transporter (PHT1) 126
24.2.2.7 Solute transport.carrier-mediated transport.MFS superfamily.phosphate transporter (PHT4) 6
24.2.2.8 Solute transport.carrier-mediated transport.MFS superfamily.organic phosphate/glycerol-3-phosphate permease (G3P) 2
24.2.2.9 Solute transport.carrier-mediated transport.MFS superfamily.anion transporter (NRT1/PTR) 498
24.2.20 Solute transport.carrier-mediated transport.manganese/calcium cation transporter (BICAT) 4
24.2.21 Solute transport.carrier-mediated transport.fatty acid transporter (FAX) 4
24.2.23 Solute transport.carrier-mediated transport.plastidial nitrite transporter (NITR2) 2
24.2.25 Solute transport.carrier-mediated transport.choline transporter (CHER/CTL1) 12
24.2.3 Solute transport.carrier-mediated transport.APC superfamily 4
24.2.3.1 Solute transport.carrier-mediated transport.APC superfamily.SulP family 4
24.2.3.1.1 Solute transport.carrier-mediated transport.APC superfamily.SulP family.sulfate transporter (SULTR) 62
24.2.3.1.2 Solute transport.carrier-mediated transport.APC superfamily.SulP family.molybdate transporter (MOT) 16
24.2.3.10 Solute transport.carrier-mediated transport.APC superfamily.metal cation transporter (NRAMP) 14
24.2.3.11 Solute transport.carrier-mediated transport.APC superfamily.potassium cation transporter (HAK/KUP/KT) 70
24.2.3.2.1 Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO) 16
24.2.3.3.1 Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.purine transporter (AZG) 12
24.2.3.3.2 Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.solute transporter (NAT) 12
24.2.3.4 Solute transport.carrier-mediated transport.APC superfamily.AAAP family 12
24.2.3.4.1 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (AAP) 92
24.2.3.4.2 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (LHT) 42
24.2.3.4.3 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.proline transporter (ProT) 12
24.2.3.4.4 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (ANT) 18
24.2.3.4.5 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.auxin transporter (AUX/LAX) 14
24.2.3.4.6 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.gamma-aminobutyric acid transporter (GAT) 18
24.2.3.4.7 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.solute transporter (AAAP) 58
24.2.3.5.1 Solute transport.carrier-mediated transport.APC superfamily.APC family.amino acid transporter (LAT) 50
24.2.3.5.2 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT) 14
24.2.3.5.3 Solute transport.carrier-mediated transport.APC superfamily.APC family.gamma-aminobutyric acid transporter (GABP) 64
24.2.3.6 Solute transport.carrier-mediated transport.APC superfamily.borate transporter (BOR) 14
24.2.3.7 Solute transport.carrier-mediated transport.APC superfamily.proton:urea symporter (DUR) 10
24.2.3.8 Solute transport.carrier-mediated transport.APC superfamily.aromatic amino acid transporter (HAAAP) 10
24.2.3.9 Solute transport.carrier-mediated transport.APC superfamily.cation:chloride co-transporter (CCC) 14
24.2.4.1.1 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (DTX) 256
24.2.4.1.2 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metabolite transporter (EDS5) 4
24.2.4.1.3 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD) 10
24.2.5.1.1 Solute transport.carrier-mediated transport.BART superfamily.BASS family.2-keto acid transporter (BAT) 6
24.2.5.1.2 Solute transport.carrier-mediated transport.BART superfamily.BASS family.small solute transporter (BASS) 2
24.2.5.2.2 Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin transporter (PILS) 32
24.2.6 Solute transport.carrier-mediated transport.TOC superfamily 2
24.2.6.1 Solute transport.carrier-mediated transport.TOC superfamily.sugar efflux transporter (SWEET) 134
24.2.6.2 Solute transport.carrier-mediated transport.TOC superfamily.transport protein (TSUP) 56
24.2.6.3 Solute transport.carrier-mediated transport.TOC superfamily.transport protein (NiCoT) 4
24.2.7.1 Solute transport.carrier-mediated transport.IT superfamily.DASS family 2
24.2.7.1.1 Solute transport.carrier-mediated transport.IT superfamily.DASS family.di-/tricarboxylate transporter (TDT) 28
24.2.7.1.2 Solute transport.carrier-mediated transport.IT superfamily.DASS family.dicarboxylate:malate antiporter (DIT) 10
24.2.7.2 Solute transport.carrier-mediated transport.IT superfamily.putative silicon efflux transporter (LSI2) 18
24.2.7.3 Solute transport.carrier-mediated transport.IT superfamily.proton:sodium cation antiporter (NHD) 10
24.2.7.4 Solute transport.carrier-mediated transport.IT superfamily.phosphate transporter (PHO) 28
24.2.8.1.2 Solute transport.carrier-mediated transport.CPA superfamily.CPA-1 family.proton:lithium/sodium cation antiporter (SOS1) 2
24.2.8.2 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family 6
24.2.8.2.1 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:monovalent cation antiporter (CHX) 32
24.2.8.2.2 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA) 4
24.2.9.1.1 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation antiporter (CAX) 10
24.2.9.1.2 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation:calcium cation exchanger (CCX) 12
24.2.9.1.3 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.magnesium cation:proton antiporter (MHX) 4
24.2.9.1.4 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX) 22
24.2.9.1.5 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.potassium-dependent sodium:calcium exchanger (NCKX) 2
24.2.9.2.1 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.iron/zinc cation transporter (Fe/Zn-CDF) 2
24.2.9.2.2 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.manganese cation transporter (Mn-CDF) 14
24.2.9.2.3 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.zinc cation transporter (Zn-CDF) 6
24.2.9.2.4 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.metal cation transporter 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001