Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.AAAP family.proline transporter (ProT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00166 1 CH_atr_316 2 3 0.000714919
Elaeis guineensis EG5.1_Chr8 1 CH_egu_313 2 2 0.000947329
Lolium perenne Lp_chr2_0 1 CH_lpe_446 2 3 0.000964227
Solanum lycopersicum SL4.0ch05 1 CH_sly_477 2 2 0.000352164
Spirodela polyrhiza pseudo23 1 CH_spo_21 5 8 0.0000000000000453288
Zoysia japonica ssp. nagirizaki Zjn_sc00051.1 1 CH_zjn_190 2 3 0.000332947
Amborella trichopoda AmTr_v1.0_scaffold00166 2 CH_atr_316 2 3 0.000714919
Elaeis guineensis EG5.1_Chr8 2 CH_egu_313 2 2 0.000947329
Lolium perenne Lp_chr2_0 2 CH_lpe_446 2 3 0.000964227
Solanum lycopersicum SL4.0ch05 2 CH_sly_477 2 2 0.000352164
Spirodela polyrhiza pseudo23 2 CH_spo_21 5 8 0.0000000000000453288
Zoysia japonica ssp. nagirizaki Zjn_sc00051.1 2 CH_zjn_190 2 3 0.000332947

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001