Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.AAAP family.gamma-aminobutyric acid transporter (GAT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Glycine max Gm13 1 CH_gma_191 3 3 0.000000475419
Hordeum vulgare chr1H 1 CH_hvu_358 2 2 0.000243502
Lolium perenne Lp_chr1_0 1 CH_lpe_374 2 2 0.000482137
Marchantia polymorpha scaffold_32 1 CH_mpo_77 2 2 0.000110442
Populus trichocarpa Chr08 1 CH_ptr_500 2 2 0.000578001
Sequoiadendron giganteum chr8 1 CH_sgi_236 6 27 0.000000000000842135
Setaria italica scaffold_7 1 CH_sit_465 2 2 0.00087065
Spirodela polyrhiza pseudo26 1 CH_spo_217 2 2 0.000611527
Setaria viridis Chr_07 1 CH_svi_470 2 2 0.000782677
Glycine max Gm13 2 CH_gma_191 3 3 0.000000475419
Hordeum vulgare chr1H 2 CH_hvu_358 2 2 0.000243502
Lolium perenne Lp_chr1_0 2 CH_lpe_374 2 2 0.000482137
Marchantia polymorpha scaffold_32 2 CH_mpo_77 2 2 0.000110442
Populus trichocarpa Chr08 2 CH_ptr_500 2 2 0.000578001
Sequoiadendron giganteum chr8 2 CH_sgi_236 6 27 0.000000000000842135
Setaria italica scaffold_7 2 CH_sit_465 2 2 0.00087065
Spirodela polyrhiza pseudo26 2 CH_spo_217 2 2 0.000611527
Setaria viridis Chr_07 2 CH_svi_470 2 2 0.000782677

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001