Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amborella trichopoda | AmTr_v1.0_scaffold00111 | 1 | CH_atr_112 | 3 | 3 | 0.000000795196 |
| Elaeis guineensis | EG5.1_Chr3 | 1 | CH_egu_71 | 3 | 3 | 0.00000161545 |
| Magnolia biondii | Chr07 | 1 | CH_mbi_290 | 3 | 8 | 0.0000237579 |
| Micromonas commoda | Chr_16 | 1 | CH_mco_17 | 2 | 2 | 0.000197961 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_1190 | 3 | 13 | 0.000290578 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_324 | 4 | 4 | 0.000000000248 |
| Saccharum spontaneum | Chr7D | 1 | CH_ssp_466 | 3 | 3 | 0.00000558867 |
| Amborella trichopoda | AmTr_v1.0_scaffold00111 | 2 | CH_atr_112 | 3 | 3 | 0.000000795196 |
| Elaeis guineensis | EG5.1_Chr3 | 2 | CH_egu_71 | 3 | 3 | 0.00000161545 |
| Magnolia biondii | Chr07 | 2 | CH_mbi_290 | 3 | 8 | 0.0000237579 |
| Micromonas commoda | Chr_16 | 2 | CH_mco_17 | 2 | 2 | 0.000197961 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_1190 | 3 | 13 | 0.000290578 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_324 | 4 | 4 | 0.000000000248 |
| Saccharum spontaneum | Chr7D | 2 | CH_ssp_466 | 3 | 3 | 0.00000558867 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |