Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.CDF superfamily.CDF family.manganese cation transporter (Mn-CDF)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Calamus simplicifolius | scaffold234 | 1 | CH_calsi_131 | 3 | 6 | 0.0000222933 |
| Chlamydomonas reinhardtii | chromosome_3 | 1 | CH_cre_13 | 3 | 6 | 0.000000388014 |
| Magnolia biondii | Chr18 | 1 | CH_mbi_259 | 3 | 7 | 0.00000693144 |
| Populus trichocarpa | Chr10 | 1 | CH_ptr_105 | 4 | 4 | 0.000000000191187 |
| Populus trichocarpa | Chr01 | 1 | CH_ptr_213 | 3 | 3 | 0.000000826885 |
| Secale cereale | GWHASIY00000003 | 1 | CH_sce_410 | 3 | 7 | 0.0000179454 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_166 | 5 | 6 | 0.00000000000000532259 |
| Calamus simplicifolius | scaffold234 | 2 | CH_calsi_131 | 3 | 6 | 0.0000222933 |
| Chlamydomonas reinhardtii | chromosome_3 | 2 | CH_cre_13 | 3 | 6 | 0.000000388014 |
| Magnolia biondii | Chr18 | 2 | CH_mbi_259 | 3 | 7 | 0.00000693144 |
| Populus trichocarpa | Chr10 | 2 | CH_ptr_105 | 4 | 4 | 0.000000000191187 |
| Populus trichocarpa | Chr01 | 2 | CH_ptr_213 | 3 | 3 | 0.000000826885 |
| Secale cereale | GWHASIY00000003 | 2 | CH_sce_410 | 3 | 7 | 0.0000179454 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_166 | 5 | 6 | 0.00000000000000532259 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |