Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.MFS superfamily.solute transporter (UNE2)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_117 | 1 | CH_aag_47 | 3 | 7 | 0.00000675996 |
| Aegilops tauschii | 5D | 1 | CH_ata_121 | 3 | 4 | 0.000000814638 |
| Brachypodium distachyon | Bd4 | 1 | CH_bdi_22 | 5 | 6 | 0.0000000000000364468 |
| Chara braunii | BFEA01000343 | 1 | CH_cbr_80 | 3 | 24 | 0.000156776 |
| Ceratophyllum demersum | 2 | 1 | CH_cde_192 | 2 | 2 | 0.000236939 |
| Cenchrus purpureus | GWHAORA00000015 | 1 | CH_cpu_34 | 6 | 6 | 6.41366e-17 |
| Cenchrus purpureus | GWHAORA00000002 | 1 | CH_cpu_74 | 5 | 5 | 0.000000000000230507 |
| Chlamydomonas reinhardtii | chromosome_6 | 1 | CH_cre_34 | 2 | 2 | 0.000113733 |
| Digitaria exilis | Dexi_CM05836_chr02A | 1 | CH_dex_165 | 4 | 6 | 0.0000000343711 |
| Digitaria exilis | Dexi_CM05836_chr02B | 1 | CH_dex_79 | 5 | 7 | 0.000000000019299 |
| Eragrostis curvula | Contig50 | 1 | CH_ecu_192 | 5 | 22 | 0.00000000380985 |
| Eragrostis curvula | 3 | 1 | CH_ecu_40 | 7 | 9 | 3.06475e-19 |
| Eragrostis curvula | 5 | 1 | CH_ecu_477 | 3 | 6 | 0.0000367754 |
| Elaeis guineensis | EG5.1_Chr13 | 1 | CH_egu_327 | 2 | 2 | 0.000947329 |
| Glycine max | Gm08 | 1 | CH_gma_523 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr5H | 1 | CH_hvu_107 | 4 | 10 | 0.00000000530304 |
| Lolium perenne | Lp_chr4_0 | 1 | CH_lpe_435 | 2 | 2 | 0.000899989 |
| Lolium perenne | Lp_chr5_0 | 1 | CH_lpe_51 | 4 | 6 | 0.000000000104595 |
| Magnolia biondii | Chr02 | 1 | CH_mbi_470 | 2 | 2 | 0.000145698 |
| Miscanthus sinensis | Chr03 | 1 | CH_msi_231 | 3 | 4 | 0.00000282996 |
| Miscanthus sinensis | Chr04 | 1 | CH_msi_35 | 5 | 6 | 0.000000000000145247 |
| Oryza alta | GWHAZTO00000021 | 1 | CH_oal_12 | 7 | 10 | 1.07888e-19 |
| Oryza alta | GWHAZTO00000008 | 1 | CH_oal_274 | 3 | 4 | 0.00000375161 |
| Oryza alta | GWHAZTO00000020 | 1 | CH_oal_302 | 3 | 5 | 0.00000937758 |
| Oryza alta | GWHAZTO00000009 | 1 | CH_oal_67 | 4 | 4 | 0.000000000179581 |
| Oryza brachyantha | 9 | 1 | CH_obr_48 | 4 | 6 | 0.000000000671269 |
| Oryza sativa ssp. indica | Chr9 | 1 | CH_osaindica_107 | 3 | 3 | 0.000000140118 |
| Oryza sativa Kitaake | Chr9 | 1 | CH_osak_47 | 5 | 5 | 0.00000000000000948632 |
| Oryza sativa ssp. japonica | chr09 | 1 | CH_osa_21 | 5 | 6 | 0.0000000000000196051 |
| Oropetium thomaeum | Chromosome_2 | 1 | CH_oth_91 | 3 | 4 | 0.00000170236 |
| Phyllostachys edulis | hic_scaffold_3 | 1 | CH_ped_39 | 5 | 5 | 0.0000000000000620861 |
| Panicum hallii | Chr02 | 1 | CH_pha_29 | 5 | 5 | 0.000000000000067747 |
| Populus trichocarpa | Chr07 | 1 | CH_ptr_391 | 2 | 2 | 0.0001734 |
| Sorghum bicolor | Chr02 | 1 | CH_sbi_32 | 5 | 5 | 0.000000000000022395 |
| Secale cereale | GWHASIY00000005 | 1 | CH_sce_105 | 4 | 4 | 0.0000000000934395 |
| Setaria italica | scaffold_2 | 1 | CH_sit_23 | 6 | 6 | 1.37007e-17 |
| Solanum lycopersicum | SL4.0ch05 | 1 | CH_sly_49 | 5 | 5 | 0.0000000000000224344 |
| Saccharum spontaneum | Chr2A | 1 | CH_ssp_187 | 4 | 6 | 0.0000000450852 |
| Saccharum spontaneum | Chr2D | 1 | CH_ssp_224 | 4 | 7 | 0.000000105163 |
| Saccharum spontaneum | Chr2C | 1 | CH_ssp_4 | 12 | 14 | 8.21869e-35 |
| Saccharum spontaneum | Chr2B | 1 | CH_ssp_40 | 6 | 9 | 0.0000000000000403036 |
| Setaria viridis | Chr_02 | 1 | CH_svi_18 | 6 | 6 | 1.49372e-17 |
| Setaria viridis | Chr_06 | 1 | CH_svi_187 | 3 | 3 | 0.00000116802 |
| Triticum aestivum | Chr5D | 1 | CH_tae_307 | 4 | 4 | 0.000000000293603 |
| Triticum aestivum | Chr5B | 1 | CH_tae_361 | 4 | 5 | 0.00000000146776 |
| Triticum aestivum | Chr5A | 1 | CH_tae_694 | 3 | 3 | 0.00000136477 |
| Triticum dicoccoides | 5A | 1 | CH_tdi_129 | 4 | 6 | 0.00000000360088 |
| Triticum dicoccoides | 5B | 1 | CH_tdi_130 | 4 | 6 | 0.00000000360088 |
| Triticum turgidum | chr5A | 1 | CH_ttu_296 | 3 | 3 | 0.00000119559 |
| Triticum turgidum | chr5B | 1 | CH_ttu_68 | 5 | 6 | 0.000000000000367826 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00039.1 | 1 | CH_zjn_34 | 3 | 3 | 0.000000172453 |
| Zea mays B73 | 7 | 1 | CH_zma_12 | 5 | 5 | 0.00000000000000646019 |
| Anthoceros agrestis | Sc2ySwM_117 | 2 | CH_aag_47 | 3 | 7 | 0.00000675996 |
| Aegilops tauschii | 5D | 2 | CH_ata_121 | 3 | 4 | 0.000000814638 |
| Brachypodium distachyon | Bd4 | 2 | CH_bdi_22 | 5 | 6 | 0.0000000000000364468 |
| Chara braunii | BFEA01000343 | 2 | CH_cbr_80 | 3 | 24 | 0.000156776 |
| Ceratophyllum demersum | 2 | 2 | CH_cde_192 | 2 | 2 | 0.000236939 |
| Cenchrus purpureus | GWHAORA00000015 | 2 | CH_cpu_34 | 6 | 6 | 6.41366e-17 |
| Cenchrus purpureus | GWHAORA00000002 | 2 | CH_cpu_74 | 5 | 5 | 0.000000000000230507 |
| Chlamydomonas reinhardtii | chromosome_6 | 2 | CH_cre_34 | 2 | 2 | 0.000113733 |
| Digitaria exilis | Dexi_CM05836_chr02A | 2 | CH_dex_165 | 4 | 6 | 0.0000000343711 |
| Digitaria exilis | Dexi_CM05836_chr02B | 2 | CH_dex_79 | 5 | 7 | 0.000000000019299 |
| Eragrostis curvula | Contig50 | 2 | CH_ecu_192 | 5 | 22 | 0.00000000380985 |
| Eragrostis curvula | 3 | 2 | CH_ecu_40 | 7 | 9 | 3.06475e-19 |
| Eragrostis curvula | 5 | 2 | CH_ecu_477 | 3 | 6 | 0.0000367754 |
| Elaeis guineensis | EG5.1_Chr13 | 2 | CH_egu_327 | 2 | 2 | 0.000947329 |
| Glycine max | Gm08 | 2 | CH_gma_523 | 2 | 2 | 0.000379557 |
| Hordeum vulgare | chr5H | 2 | CH_hvu_107 | 4 | 10 | 0.00000000530304 |
| Lolium perenne | Lp_chr4_0 | 2 | CH_lpe_435 | 2 | 2 | 0.000899989 |
| Lolium perenne | Lp_chr5_0 | 2 | CH_lpe_51 | 4 | 6 | 0.000000000104595 |
| Magnolia biondii | Chr02 | 2 | CH_mbi_470 | 2 | 2 | 0.000145698 |
| Miscanthus sinensis | Chr03 | 2 | CH_msi_231 | 3 | 4 | 0.00000282996 |
| Miscanthus sinensis | Chr04 | 2 | CH_msi_35 | 5 | 6 | 0.000000000000145247 |
| Oryza alta | GWHAZTO00000021 | 2 | CH_oal_12 | 7 | 10 | 1.07888e-19 |
| Oryza alta | GWHAZTO00000008 | 2 | CH_oal_274 | 3 | 4 | 0.00000375161 |
| Oryza alta | GWHAZTO00000020 | 2 | CH_oal_302 | 3 | 5 | 0.00000937758 |
| Oryza alta | GWHAZTO00000009 | 2 | CH_oal_67 | 4 | 4 | 0.000000000179581 |
| Oryza brachyantha | 9 | 2 | CH_obr_48 | 4 | 6 | 0.000000000671269 |
| Oryza sativa ssp. indica | Chr9 | 2 | CH_osaindica_107 | 3 | 3 | 0.000000140118 |
| Oryza sativa Kitaake | Chr9 | 2 | CH_osak_47 | 5 | 5 | 0.00000000000000948632 |
| Oryza sativa ssp. japonica | chr09 | 2 | CH_osa_21 | 5 | 6 | 0.0000000000000196051 |
| Oropetium thomaeum | Chromosome_2 | 2 | CH_oth_91 | 3 | 4 | 0.00000170236 |
| Phyllostachys edulis | hic_scaffold_3 | 2 | CH_ped_39 | 5 | 5 | 0.0000000000000620861 |
| Panicum hallii | Chr02 | 2 | CH_pha_29 | 5 | 5 | 0.000000000000067747 |
| Populus trichocarpa | Chr07 | 2 | CH_ptr_391 | 2 | 2 | 0.0001734 |
| Sorghum bicolor | Chr02 | 2 | CH_sbi_32 | 5 | 5 | 0.000000000000022395 |
| Secale cereale | GWHASIY00000005 | 2 | CH_sce_105 | 4 | 4 | 0.0000000000934395 |
| Setaria italica | scaffold_2 | 2 | CH_sit_23 | 6 | 6 | 1.37007e-17 |
| Solanum lycopersicum | SL4.0ch05 | 2 | CH_sly_49 | 5 | 5 | 0.0000000000000224344 |
| Saccharum spontaneum | Chr2A | 2 | CH_ssp_187 | 4 | 6 | 0.0000000450852 |
| Saccharum spontaneum | Chr2D | 2 | CH_ssp_224 | 4 | 7 | 0.000000105163 |
| Saccharum spontaneum | Chr2C | 2 | CH_ssp_4 | 12 | 14 | 8.21869e-35 |
| Saccharum spontaneum | Chr2B | 2 | CH_ssp_40 | 6 | 9 | 0.0000000000000403036 |
| Setaria viridis | Chr_02 | 2 | CH_svi_18 | 6 | 6 | 1.49372e-17 |
| Setaria viridis | Chr_06 | 2 | CH_svi_187 | 3 | 3 | 0.00000116802 |
| Triticum aestivum | Chr5D | 2 | CH_tae_307 | 4 | 4 | 0.000000000293603 |
| Triticum aestivum | Chr5B | 2 | CH_tae_361 | 4 | 5 | 0.00000000146776 |
| Triticum aestivum | Chr5A | 2 | CH_tae_694 | 3 | 3 | 0.00000136477 |
| Triticum dicoccoides | 5A | 2 | CH_tdi_129 | 4 | 6 | 0.00000000360088 |
| Triticum dicoccoides | 5B | 2 | CH_tdi_130 | 4 | 6 | 0.00000000360088 |
| Triticum turgidum | chr5A | 2 | CH_ttu_296 | 3 | 3 | 0.00000119559 |
| Triticum turgidum | chr5B | 2 | CH_ttu_68 | 5 | 6 | 0.000000000000367826 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00039.1 | 2 | CH_zjn_34 | 3 | 3 | 0.000000172453 |
| Zea mays B73 | 7 | 2 | CH_zma_12 | 5 | 5 | 0.00000000000000646019 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |