Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (ANT)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Asparagus officinalis AsparagusV1_05 1 CH_aof_11 3 3 0.00000000857144
Calamus simplicifolius scaffold18 1 CH_calsi_49 3 3 0.0000000270412
Dioscorea dumetorum contig468 1 CH_ddu_265 2 2 0.000414536
Elaeis guineensis EG5.1_Chr8 1 CH_egu_229 2 2 0.000284199
Hordeum vulgare chr5H 1 CH_hvu_422 2 2 0.000608754
Miscanthus sinensis Chr11 1 CH_msi_626 2 2 0.000901568
Sorghum bicolor Chr06 1 CH_sbi_423 2 2 0.000586682
Sequoiadendron giganteum chr9 1 CH_sgi_333 4 10 0.000000000364099
Solanum lycopersicum SL4.0ch02 1 CH_sly_519 2 2 0.000586941
Asparagus officinalis AsparagusV1_05 2 CH_aof_11 3 3 0.00000000857144
Calamus simplicifolius scaffold18 2 CH_calsi_49 3 3 0.0000000270412
Dioscorea dumetorum contig468 2 CH_ddu_265 2 2 0.000414536
Elaeis guineensis EG5.1_Chr8 2 CH_egu_229 2 2 0.000284199
Hordeum vulgare chr5H 2 CH_hvu_422 2 2 0.000608754
Miscanthus sinensis Chr11 2 CH_msi_626 2 2 0.000901568
Sorghum bicolor Chr06 2 CH_sbi_423 2 2 0.000586682
Sequoiadendron giganteum chr9 2 CH_sgi_333 4 10 0.000000000364099
Solanum lycopersicum SL4.0ch02 2 CH_sly_519 2 2 0.000586941

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001