Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.APC superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Oryza alta GWHAZTO00000013 1 CH_oal_536 5 16 0.000131404
Populus trichocarpa Chr02 1 CH_ptr_98 9 22 0.0000000000475229
Oryza alta GWHAZTO00000013 2 CH_oal_536 5 16 0.000131404
Populus trichocarpa Chr02 2 CH_ptr_98 9 22 0.0000000000475229

Available child term results

Ontology identifier Description Number of clusters
24.2.3.1 Solute transport.carrier-mediated transport.APC superfamily.SulP family 4
24.2.3.1.1 Solute transport.carrier-mediated transport.APC superfamily.SulP family.sulfate transporter (SULTR) 62
24.2.3.1.2 Solute transport.carrier-mediated transport.APC superfamily.SulP family.molybdate transporter (MOT) 16
24.2.3.10 Solute transport.carrier-mediated transport.APC superfamily.metal cation transporter (NRAMP) 14
24.2.3.11 Solute transport.carrier-mediated transport.APC superfamily.potassium cation transporter (HAK/KUP/KT) 70
24.2.3.2.1 Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO) 16
24.2.3.3.1 Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.purine transporter (AZG) 12
24.2.3.3.2 Solute transport.carrier-mediated transport.APC superfamily.NCS-2 family.solute transporter (NAT) 12
24.2.3.4 Solute transport.carrier-mediated transport.APC superfamily.AAAP family 12
24.2.3.4.1 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (AAP) 92
24.2.3.4.2 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (LHT) 42
24.2.3.4.3 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.proline transporter (ProT) 12
24.2.3.4.4 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.amino acid transporter (ANT) 18
24.2.3.4.5 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.auxin transporter (AUX/LAX) 14
24.2.3.4.6 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.gamma-aminobutyric acid transporter (GAT) 18
24.2.3.4.7 Solute transport.carrier-mediated transport.APC superfamily.AAAP family.solute transporter (AAAP) 58
24.2.3.5.1 Solute transport.carrier-mediated transport.APC superfamily.APC family.amino acid transporter (LAT) 50
24.2.3.5.2 Solute transport.carrier-mediated transport.APC superfamily.APC family.cationic amino acid transporter (CAT) 14
24.2.3.5.3 Solute transport.carrier-mediated transport.APC superfamily.APC family.gamma-aminobutyric acid transporter (GABP) 64
24.2.3.6 Solute transport.carrier-mediated transport.APC superfamily.borate transporter (BOR) 14
24.2.3.7 Solute transport.carrier-mediated transport.APC superfamily.proton:urea symporter (DUR) 10
24.2.3.8 Solute transport.carrier-mediated transport.APC superfamily.aromatic amino acid transporter (HAAAP) 10
24.2.3.9 Solute transport.carrier-mediated transport.APC superfamily.cation:chloride co-transporter (CCC) 14

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001