Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.TOC superfamily.sugar efflux transporter (SWEET)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Ananas comosus | LG16 | 1 | CH_aco_57 | 3 | 4 | 0.0000336692 |
| Allium sativum | chr8 | 1 | CH_asa_110 | 6 | 25 | 0.00000000154866 |
| Allium sativum | chr2 | 1 | CH_asa_174 | 5 | 15 | 0.0000000378462 |
| Calamus simplicifolius | scaffold1183 | 1 | CH_calsi_62 | 4 | 7 | 0.000000122981 |
| Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_564 | 4 | 16 | 0.0000506289 |
| Digitaria exilis | Dexi_CM05836_chr01B | 1 | CH_dex_383 | 3 | 3 | 0.0000392478 |
| Digitaria exilis | Dexi_CM05836_chr01A | 1 | CH_dex_384 | 3 | 3 | 0.0000392478 |
| Digitaria exilis | Dexi_CM05836_chr05B | 1 | CH_dex_467 | 3 | 4 | 0.00015689 |
| Eragrostis curvula | 6 | 1 | CH_ecu_124 | 6 | 13 | 0.0000000000176739 |
| Eragrostis curvula | 2 | 1 | CH_ecu_173 | 6 | 24 | 0.00000000137688 |
| Eragrostis curvula | 1 | 1 | CH_ecu_295 | 4 | 6 | 0.000000293242 |
| Eragrostis curvula | Contig50 | 1 | CH_ecu_821 | 3 | 7 | 0.000903935 |
| Glycine max | Gm04 | 1 | CH_gma_320 | 3 | 3 | 0.0000373766 |
| Glycine max | Gm06 | 1 | CH_gma_321 | 3 | 3 | 0.0000373766 |
| Musa acuminata | chr06 | 1 | CH_mac_97 | 3 | 3 | 0.0000141646 |
| Magnolia biondii | Chr18 | 1 | CH_mbi_186 | 4 | 11 | 0.000000346327 |
| Miscanthus sinensis | Chr15 | 1 | CH_msi_340 | 3 | 4 | 0.0000767313 |
| Oryza brachyantha | 1 | 1 | CH_obr_242 | 3 | 7 | 0.000213207 |
| Oryza sativa Kitaake | Chr9 | 1 | CH_osak_159 | 5 | 22 | 0.0000000662049 |
| Oryza sativa ssp. japonica | chr09 | 1 | CH_osa_54 | 6 | 25 | 0.000000000218595 |
| Oropetium thomaeum | Chromosome_10 | 1 | CH_oth_37 | 5 | 11 | 0.00000000233586 |
| Phyllostachys edulis | hic_scaffold_13 | 1 | CH_ped_401 | 3 | 5 | 0.000306948 |
| Panicum hallii | Chr01 | 1 | CH_pha_185 | 4 | 12 | 0.00000257092 |
| Panicum hallii | Chr08 | 1 | CH_pha_205 | 3 | 3 | 0.00000897091 |
| Populus trichocarpa | Chr15 | 1 | CH_ptr_146 | 4 | 4 | 0.00000000866137 |
| Populus trichocarpa | Chr13 | 1 | CH_ptr_195 | 4 | 7 | 0.000000302659 |
| Populus trichocarpa | Chr02 | 1 | CH_ptr_267 | 3 | 3 | 0.0000130297 |
| Sorghum bicolor | Chr08 | 1 | CH_sbi_249 | 3 | 4 | 0.0000365582 |
| Secale cereale | GWHASIY00000006 | 1 | CH_sce_217 | 4 | 5 | 0.0000000934449 |
| Secale cereale | GWHASIY00000007 | 1 | CH_sce_62 | 6 | 9 | 0.000000000000858159 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_1000 | 3 | 3 | 0.000109842 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_110 | 9 | 14 | 9.53919e-19 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_1176 | 4 | 15 | 0.000198506 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_1286 | 3 | 4 | 0.000438917 |
| Sequoiadendron giganteum | chr4 | 1 | CH_sgi_271 | 6 | 8 | 0.00000000000698219 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_34 | 12 | 15 | 3.47367e-28 |
| Sequoiadendron giganteum | chr7 | 1 | CH_sgi_538 | 4 | 4 | 0.000000147159 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_578 | 4 | 5 | 0.000000735003 |
| Setaria italica | scaffold_1 | 1 | CH_sit_244 | 3 | 3 | 0.0000102287 |
| Setaria italica | scaffold_3 | 1 | CH_sit_409 | 3 | 7 | 0.000357308 |
| Solanum lycopersicum | SL4.0ch04 | 1 | CH_sly_139 | 4 | 4 | 0.0000000218153 |
| Solanum lycopersicum | SL4.0ch06 | 1 | CH_sly_270 | 3 | 3 | 0.0000256315 |
| Solanum lycopersicum | SL4.0ch03 | 1 | CH_sly_33 | 7 | 7 | 1.08418e-17 |
| Saccharum spontaneum | Chr4C | 1 | CH_ssp_1344 | 4 | 27 | 0.000902821 |
| Saccharum spontaneum | Chr4A | 1 | CH_ssp_638 | 3 | 3 | 0.0000600281 |
| Saccharum spontaneum | Chr6C | 1 | CH_ssp_639 | 3 | 3 | 0.0000600281 |
| Saccharum spontaneum | Chr4B | 1 | CH_ssp_936 | 3 | 4 | 0.000239953 |
| Setaria viridis | Chr_01 | 1 | CH_svi_251 | 3 | 4 | 0.0000330496 |
| Setaria viridis | Chr_03 | 1 | CH_svi_492 | 3 | 10 | 0.00098889 |
| Triticum aestivum | Chr7A | 1 | CH_tae_1040 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6B | 1 | CH_tae_1041 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6A | 1 | CH_tae_1042 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6D | 1 | CH_tae_1043 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr2D | 1 | CH_tae_1044 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr7B | 1 | CH_tae_160 | 6 | 6 | 0.0000000000000879336 |
| Triticum aestivum | Chr2B | 1 | CH_tae_279 | 5 | 5 | 0.0000000000930791 |
| Triticum aestivum | Chr6B | 1 | CH_tae_521 | 4 | 4 | 0.0000000975605 |
| Triticum aestivum | Chr6D | 1 | CH_tae_522 | 4 | 4 | 0.0000000975605 |
| Triticum dicoccoides | 6A | 1 | CH_tdi_353 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 6A | 1 | CH_tdi_354 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 6B | 1 | CH_tdi_355 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_356 | 3 | 3 | 0.0000292123 |
| Triticum turgidum | chr2B | 1 | CH_ttu_89 | 5 | 5 | 0.0000000000205365 |
| Vanilla planifolia | CM028152.1 | 1 | CH_vpl_213 | 3 | 4 | 0.0000957494 |
| Vanilla planifolia | CM028163.1 | 1 | CH_vpl_82 | 6 | 75 | 0.00000281469 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00055.1 | 1 | CH_zjn_21 | 4 | 4 | 0.00000000894819 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00130.1 | 1 | CH_zjn_25 | 4 | 5 | 0.0000000447189 |
| Ananas comosus | LG16 | 2 | CH_aco_57 | 3 | 4 | 0.0000336692 |
| Allium sativum | chr8 | 2 | CH_asa_110 | 6 | 25 | 0.00000000154866 |
| Allium sativum | chr2 | 2 | CH_asa_174 | 5 | 15 | 0.0000000378462 |
| Calamus simplicifolius | scaffold1183 | 2 | CH_calsi_62 | 4 | 7 | 0.000000122981 |
| Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_564 | 4 | 16 | 0.0000506289 |
| Digitaria exilis | Dexi_CM05836_chr01B | 2 | CH_dex_383 | 3 | 3 | 0.0000392478 |
| Digitaria exilis | Dexi_CM05836_chr01A | 2 | CH_dex_384 | 3 | 3 | 0.0000392478 |
| Digitaria exilis | Dexi_CM05836_chr05B | 2 | CH_dex_467 | 3 | 4 | 0.00015689 |
| Eragrostis curvula | 6 | 2 | CH_ecu_124 | 6 | 13 | 0.0000000000176739 |
| Eragrostis curvula | 2 | 2 | CH_ecu_173 | 6 | 24 | 0.00000000137688 |
| Eragrostis curvula | 1 | 2 | CH_ecu_295 | 4 | 6 | 0.000000293242 |
| Eragrostis curvula | Contig50 | 2 | CH_ecu_821 | 3 | 7 | 0.000903935 |
| Glycine max | Gm04 | 2 | CH_gma_320 | 3 | 3 | 0.0000373766 |
| Glycine max | Gm06 | 2 | CH_gma_321 | 3 | 3 | 0.0000373766 |
| Musa acuminata | chr06 | 2 | CH_mac_97 | 3 | 3 | 0.0000141646 |
| Magnolia biondii | Chr18 | 2 | CH_mbi_186 | 4 | 11 | 0.000000346327 |
| Miscanthus sinensis | Chr15 | 2 | CH_msi_340 | 3 | 4 | 0.0000767313 |
| Oryza brachyantha | 1 | 2 | CH_obr_242 | 3 | 7 | 0.000213207 |
| Oryza sativa Kitaake | Chr9 | 2 | CH_osak_159 | 5 | 22 | 0.0000000662049 |
| Oryza sativa ssp. japonica | chr09 | 2 | CH_osa_54 | 6 | 25 | 0.000000000218595 |
| Oropetium thomaeum | Chromosome_10 | 2 | CH_oth_37 | 5 | 11 | 0.00000000233586 |
| Phyllostachys edulis | hic_scaffold_13 | 2 | CH_ped_401 | 3 | 5 | 0.000306948 |
| Panicum hallii | Chr01 | 2 | CH_pha_185 | 4 | 12 | 0.00000257092 |
| Panicum hallii | Chr08 | 2 | CH_pha_205 | 3 | 3 | 0.00000897091 |
| Populus trichocarpa | Chr15 | 2 | CH_ptr_146 | 4 | 4 | 0.00000000866137 |
| Populus trichocarpa | Chr13 | 2 | CH_ptr_195 | 4 | 7 | 0.000000302659 |
| Populus trichocarpa | Chr02 | 2 | CH_ptr_267 | 3 | 3 | 0.0000130297 |
| Sorghum bicolor | Chr08 | 2 | CH_sbi_249 | 3 | 4 | 0.0000365582 |
| Secale cereale | GWHASIY00000006 | 2 | CH_sce_217 | 4 | 5 | 0.0000000934449 |
| Secale cereale | GWHASIY00000007 | 2 | CH_sce_62 | 6 | 9 | 0.000000000000858159 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_1000 | 3 | 3 | 0.000109842 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_110 | 9 | 14 | 9.53919e-19 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_1176 | 4 | 15 | 0.000198506 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_1286 | 3 | 4 | 0.000438917 |
| Sequoiadendron giganteum | chr4 | 2 | CH_sgi_271 | 6 | 8 | 0.00000000000698219 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_34 | 12 | 15 | 3.47367e-28 |
| Sequoiadendron giganteum | chr7 | 2 | CH_sgi_538 | 4 | 4 | 0.000000147159 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_578 | 4 | 5 | 0.000000735003 |
| Setaria italica | scaffold_1 | 2 | CH_sit_244 | 3 | 3 | 0.0000102287 |
| Setaria italica | scaffold_3 | 2 | CH_sit_409 | 3 | 7 | 0.000357308 |
| Solanum lycopersicum | SL4.0ch04 | 2 | CH_sly_139 | 4 | 4 | 0.0000000218153 |
| Solanum lycopersicum | SL4.0ch06 | 2 | CH_sly_270 | 3 | 3 | 0.0000256315 |
| Solanum lycopersicum | SL4.0ch03 | 2 | CH_sly_33 | 7 | 7 | 1.08418e-17 |
| Saccharum spontaneum | Chr4C | 2 | CH_ssp_1344 | 4 | 27 | 0.000902821 |
| Saccharum spontaneum | Chr4A | 2 | CH_ssp_638 | 3 | 3 | 0.0000600281 |
| Saccharum spontaneum | Chr6C | 2 | CH_ssp_639 | 3 | 3 | 0.0000600281 |
| Saccharum spontaneum | Chr4B | 2 | CH_ssp_936 | 3 | 4 | 0.000239953 |
| Setaria viridis | Chr_01 | 2 | CH_svi_251 | 3 | 4 | 0.0000330496 |
| Setaria viridis | Chr_03 | 2 | CH_svi_492 | 3 | 10 | 0.00098889 |
| Triticum aestivum | Chr7A | 2 | CH_tae_1040 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6B | 2 | CH_tae_1041 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6A | 2 | CH_tae_1042 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr6D | 2 | CH_tae_1043 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr2D | 2 | CH_tae_1044 | 3 | 3 | 0.000101266 |
| Triticum aestivum | Chr7B | 2 | CH_tae_160 | 6 | 6 | 0.0000000000000879336 |
| Triticum aestivum | Chr2B | 2 | CH_tae_279 | 5 | 5 | 0.0000000000930791 |
| Triticum aestivum | Chr6B | 2 | CH_tae_521 | 4 | 4 | 0.0000000975605 |
| Triticum aestivum | Chr6D | 2 | CH_tae_522 | 4 | 4 | 0.0000000975605 |
| Triticum dicoccoides | 6A | 2 | CH_tdi_353 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 6A | 2 | CH_tdi_354 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 6B | 2 | CH_tdi_355 | 3 | 3 | 0.0000292123 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_356 | 3 | 3 | 0.0000292123 |
| Triticum turgidum | chr2B | 2 | CH_ttu_89 | 5 | 5 | 0.0000000000205365 |
| Vanilla planifolia | CM028152.1 | 2 | CH_vpl_213 | 3 | 4 | 0.0000957494 |
| Vanilla planifolia | CM028163.1 | 2 | CH_vpl_82 | 6 | 75 | 0.00000281469 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00055.1 | 2 | CH_zjn_21 | 4 | 4 | 0.00000000894819 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00130.1 | 2 | CH_zjn_25 | 4 | 5 | 0.0000000447189 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |