Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.MFS superfamily.SP family.polyol/monosaccharide transporter (PLT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 2D | 1 | CH_ata_184 | 3 | 6 | 0.0000330741 |
| Amborella trichopoda | AmTr_v1.0_scaffold00059 | 1 | CH_atr_130 | 3 | 4 | 0.00000318009 |
| Brachypodium distachyon | Bd1 | 1 | CH_bdi_115 | 3 | 3 | 0.00000125499 |
| Calamus simplicifolius | scaffold312 | 1 | CH_calsi_75 | 3 | 5 | 0.000000270381 |
| Cenchrus purpureus | GWHAORA00000001 | 1 | CH_cpu_102 | 5 | 5 | 0.00000000000394413 |
| Cenchrus purpureus | GWHAORA00000002 | 1 | CH_cpu_217 | 4 | 4 | 0.00000000729021 |
| Cenchrus purpureus | GWHAORA00000010 | 1 | CH_cpu_218 | 4 | 4 | 0.00000000729021 |
| Cenchrus purpureus | GWHAORA00000003 | 1 | CH_cpu_492 | 3 | 3 | 0.0000131009 |
| Cenchrus purpureus | GWHAORA00000009 | 1 | CH_cpu_714 | 3 | 6 | 0.000261678 |
| Dioscorea dumetorum | contig2 | 1 | CH_ddu_294 | 2 | 2 | 0.000690894 |
| Digitaria exilis | Dexi_CM05836_chr08B | 1 | CH_dex_158 | 4 | 4 | 0.0000000217906 |
| Digitaria exilis | Dexi_CM05836_chr07B | 1 | CH_dex_368 | 3 | 3 | 0.0000289776 |
| Digitaria exilis | Dexi_CM05836_chr03A | 1 | CH_dex_48 | 6 | 7 | 0.0000000000000805433 |
| Digitaria exilis | Dexi_CM05836_chr02A | 1 | CH_dex_49 | 6 | 7 | 0.0000000000000805433 |
| Digitaria exilis | Dexi_CM05836_chr03B | 1 | CH_dex_54 | 6 | 9 | 0.000000000000321974 |
| Digitaria exilis | Dexi_CM05836_chr07A | 1 | CH_dex_550 | 3 | 5 | 0.00028944 |
| Digitaria exilis | Dexi_CM05836_chr02B | 1 | CH_dex_92 | 5 | 6 | 0.0000000000960743 |
| Eragrostis curvula | Contig30 | 1 | CH_ecu_399 | 3 | 3 | 0.00000456412 |
| Eragrostis curvula | Contig4 | 1 | CH_ecu_455 | 4 | 24 | 0.0000196152 |
| Eragrostis curvula | 4 | 1 | CH_ecu_78 | 6 | 9 | 0.0000000000000222731 |
| Eragrostis curvula | 2 | 1 | CH_ecu_780 | 3 | 11 | 0.000751126 |
| Glycine max | Gm11 | 1 | CH_gma_37 | 6 | 8 | 0.0000000000000026921 |
| Hordeum vulgare | chr2H | 1 | CH_hvu_224 | 3 | 5 | 0.00000898958 |
| Lolium perenne | Lp_chr2_0 | 1 | CH_lpe_247 | 3 | 10 | 0.0000676218 |
| Magnolia biondii | Chr08 | 1 | CH_mbi_241 | 3 | 8 | 0.00000396109 |
| Miscanthus sinensis | Chr04 | 1 | CH_msi_253 | 3 | 3 | 0.00000509475 |
| Miscanthus sinensis | Chr03 | 1 | CH_msi_52 | 5 | 6 | 0.0000000000047527 |
| Oryza alta | GWHAZTO00000011 | 1 | CH_oal_356 | 3 | 7 | 0.0000553892 |
| Oryza sativa ssp. indica | Chr11 | 1 | CH_osaindica_177 | 3 | 4 | 0.00000582752 |
| Oryza sativa Kitaake | Chr11 | 1 | CH_osak_119 | 4 | 5 | 0.00000000267699 |
| Oropetium thomaeum | Chromosome_7 | 1 | CH_oth_33 | 4 | 4 | 0.00000000108332 |
| Panicum hallii | Chr03 | 1 | CH_pha_193 | 3 | 3 | 0.00000490842 |
| Panicum hallii | Chr08 | 1 | CH_pha_224 | 3 | 5 | 0.0000490471 |
| Panicum hallii | Chr02 | 1 | CH_pha_96 | 4 | 5 | 0.0000000114056 |
| Sorghum bicolor | Chr05 | 1 | CH_sbi_47 | 6 | 12 | 0.000000000000558967 |
| Sorghum bicolor | Chr02 | 1 | CH_sbi_94 | 4 | 4 | 0.00000000293537 |
| Secale cereale | GWHASIY00000002 | 1 | CH_sce_144 | 4 | 4 | 0.00000000169465 |
| Sequoiadendron giganteum | chr6 | 1 | CH_sgi_117 | 6 | 7 | 3.63034e-18 |
| Sequoiadendron giganteum | chr10 | 1 | CH_sgi_633 | 3 | 5 | 0.00000298946 |
| Setaria italica | scaffold_8 | 1 | CH_sit_11 | 9 | 20 | 3.99516e-20 |
| Setaria italica | scaffold_2 | 1 | CH_sit_242 | 3 | 3 | 0.0000102287 |
| Setaria italica | scaffold_3 | 1 | CH_sit_321 | 3 | 5 | 0.000102187 |
| Solanum lycopersicum | SL4.0ch02 | 1 | CH_sly_192 | 3 | 4 | 0.000000723385 |
| Spirodela polyrhiza | pseudo2 | 1 | CH_spo_180 | 2 | 2 | 0.000305764 |
| Saccharum spontaneum | Chr6D | 1 | CH_ssp_205 | 4 | 5 | 0.0000000694494 |
| Saccharum spontaneum | Chr2C | 1 | CH_ssp_206 | 4 | 5 | 0.0000000694494 |
| Saccharum spontaneum | Chr2A | 1 | CH_ssp_567 | 3 | 3 | 0.0000224017 |
| Saccharum spontaneum | Chr6A | 1 | CH_ssp_721 | 3 | 4 | 0.0000895638 |
| Saccharum spontaneum | Chr6B | 1 | CH_ssp_867 | 3 | 5 | 0.000223803 |
| Saccharum spontaneum | Chr1D | 1 | CH_ssp_947 | 4 | 28 | 0.000281152 |
| Setaria viridis | Chr_08 | 1 | CH_svi_19 | 8 | 20 | 2.0407e-17 |
| Setaria viridis | Chr_02 | 1 | CH_svi_219 | 3 | 3 | 0.00000723275 |
| Setaria viridis | Chr_03 | 1 | CH_svi_325 | 3 | 6 | 0.000144474 |
| Triticum aestivum | Chr2B | 1 | CH_tae_395 | 4 | 4 | 0.00000000416104 |
| Triticum aestivum | Chr2A | 1 | CH_tae_396 | 4 | 4 | 0.00000000416104 |
| Triticum aestivum | Chr2D | 1 | CH_tae_462 | 4 | 5 | 0.000000020798 |
| Triticum dicoccoides | 2B | 1 | CH_tdi_123 | 4 | 4 | 0.00000000215072 |
| Triticum dicoccoides | 2A | 1 | CH_tdi_286 | 3 | 3 | 0.0000053666 |
| Triticum turgidum | chr2B | 1 | CH_ttu_152 | 4 | 4 | 0.00000000250994 |
| Triticum turgidum | chr2A | 1 | CH_ttu_372 | 3 | 3 | 0.00000594866 |
| Vanilla planifolia | CM028152.1 | 1 | CH_vpl_54 | 4 | 17 | 0.000000201229 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00096.1 | 1 | CH_zjn_63 | 4 | 20 | 0.00000284177 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 1 | CH_zjn_84 | 3 | 5 | 0.0000198841 |
| Zea mays B73 | 7 | 1 | CH_zma_122 | 3 | 4 | 0.00000878222 |
| Zea mays B73 | 4 | 1 | CH_zma_132 | 3 | 5 | 0.0000219495 |
| Aegilops tauschii | 2D | 2 | CH_ata_184 | 3 | 6 | 0.0000330741 |
| Amborella trichopoda | AmTr_v1.0_scaffold00059 | 2 | CH_atr_130 | 3 | 4 | 0.00000318009 |
| Brachypodium distachyon | Bd1 | 2 | CH_bdi_115 | 3 | 3 | 0.00000125499 |
| Calamus simplicifolius | scaffold312 | 2 | CH_calsi_75 | 3 | 5 | 0.000000270381 |
| Cenchrus purpureus | GWHAORA00000001 | 2 | CH_cpu_102 | 5 | 5 | 0.00000000000394413 |
| Cenchrus purpureus | GWHAORA00000002 | 2 | CH_cpu_217 | 4 | 4 | 0.00000000729021 |
| Cenchrus purpureus | GWHAORA00000010 | 2 | CH_cpu_218 | 4 | 4 | 0.00000000729021 |
| Cenchrus purpureus | GWHAORA00000003 | 2 | CH_cpu_492 | 3 | 3 | 0.0000131009 |
| Cenchrus purpureus | GWHAORA00000009 | 2 | CH_cpu_714 | 3 | 6 | 0.000261678 |
| Dioscorea dumetorum | contig2 | 2 | CH_ddu_294 | 2 | 2 | 0.000690894 |
| Digitaria exilis | Dexi_CM05836_chr08B | 2 | CH_dex_158 | 4 | 4 | 0.0000000217906 |
| Digitaria exilis | Dexi_CM05836_chr07B | 2 | CH_dex_368 | 3 | 3 | 0.0000289776 |
| Digitaria exilis | Dexi_CM05836_chr03A | 2 | CH_dex_48 | 6 | 7 | 0.0000000000000805433 |
| Digitaria exilis | Dexi_CM05836_chr02A | 2 | CH_dex_49 | 6 | 7 | 0.0000000000000805433 |
| Digitaria exilis | Dexi_CM05836_chr03B | 2 | CH_dex_54 | 6 | 9 | 0.000000000000321974 |
| Digitaria exilis | Dexi_CM05836_chr07A | 2 | CH_dex_550 | 3 | 5 | 0.00028944 |
| Digitaria exilis | Dexi_CM05836_chr02B | 2 | CH_dex_92 | 5 | 6 | 0.0000000000960743 |
| Eragrostis curvula | Contig30 | 2 | CH_ecu_399 | 3 | 3 | 0.00000456412 |
| Eragrostis curvula | Contig4 | 2 | CH_ecu_455 | 4 | 24 | 0.0000196152 |
| Eragrostis curvula | 4 | 2 | CH_ecu_78 | 6 | 9 | 0.0000000000000222731 |
| Eragrostis curvula | 2 | 2 | CH_ecu_780 | 3 | 11 | 0.000751126 |
| Glycine max | Gm11 | 2 | CH_gma_37 | 6 | 8 | 0.0000000000000026921 |
| Hordeum vulgare | chr2H | 2 | CH_hvu_224 | 3 | 5 | 0.00000898958 |
| Lolium perenne | Lp_chr2_0 | 2 | CH_lpe_247 | 3 | 10 | 0.0000676218 |
| Magnolia biondii | Chr08 | 2 | CH_mbi_241 | 3 | 8 | 0.00000396109 |
| Miscanthus sinensis | Chr04 | 2 | CH_msi_253 | 3 | 3 | 0.00000509475 |
| Miscanthus sinensis | Chr03 | 2 | CH_msi_52 | 5 | 6 | 0.0000000000047527 |
| Oryza alta | GWHAZTO00000011 | 2 | CH_oal_356 | 3 | 7 | 0.0000553892 |
| Oryza sativa ssp. indica | Chr11 | 2 | CH_osaindica_177 | 3 | 4 | 0.00000582752 |
| Oryza sativa Kitaake | Chr11 | 2 | CH_osak_119 | 4 | 5 | 0.00000000267699 |
| Oropetium thomaeum | Chromosome_7 | 2 | CH_oth_33 | 4 | 4 | 0.00000000108332 |
| Panicum hallii | Chr03 | 2 | CH_pha_193 | 3 | 3 | 0.00000490842 |
| Panicum hallii | Chr08 | 2 | CH_pha_224 | 3 | 5 | 0.0000490471 |
| Panicum hallii | Chr02 | 2 | CH_pha_96 | 4 | 5 | 0.0000000114056 |
| Sorghum bicolor | Chr05 | 2 | CH_sbi_47 | 6 | 12 | 0.000000000000558967 |
| Sorghum bicolor | Chr02 | 2 | CH_sbi_94 | 4 | 4 | 0.00000000293537 |
| Secale cereale | GWHASIY00000002 | 2 | CH_sce_144 | 4 | 4 | 0.00000000169465 |
| Sequoiadendron giganteum | chr6 | 2 | CH_sgi_117 | 6 | 7 | 3.63034e-18 |
| Sequoiadendron giganteum | chr10 | 2 | CH_sgi_633 | 3 | 5 | 0.00000298946 |
| Setaria italica | scaffold_8 | 2 | CH_sit_11 | 9 | 20 | 3.99516e-20 |
| Setaria italica | scaffold_2 | 2 | CH_sit_242 | 3 | 3 | 0.0000102287 |
| Setaria italica | scaffold_3 | 2 | CH_sit_321 | 3 | 5 | 0.000102187 |
| Solanum lycopersicum | SL4.0ch02 | 2 | CH_sly_192 | 3 | 4 | 0.000000723385 |
| Spirodela polyrhiza | pseudo2 | 2 | CH_spo_180 | 2 | 2 | 0.000305764 |
| Saccharum spontaneum | Chr6D | 2 | CH_ssp_205 | 4 | 5 | 0.0000000694494 |
| Saccharum spontaneum | Chr2C | 2 | CH_ssp_206 | 4 | 5 | 0.0000000694494 |
| Saccharum spontaneum | Chr2A | 2 | CH_ssp_567 | 3 | 3 | 0.0000224017 |
| Saccharum spontaneum | Chr6A | 2 | CH_ssp_721 | 3 | 4 | 0.0000895638 |
| Saccharum spontaneum | Chr6B | 2 | CH_ssp_867 | 3 | 5 | 0.000223803 |
| Saccharum spontaneum | Chr1D | 2 | CH_ssp_947 | 4 | 28 | 0.000281152 |
| Setaria viridis | Chr_08 | 2 | CH_svi_19 | 8 | 20 | 2.0407e-17 |
| Setaria viridis | Chr_02 | 2 | CH_svi_219 | 3 | 3 | 0.00000723275 |
| Setaria viridis | Chr_03 | 2 | CH_svi_325 | 3 | 6 | 0.000144474 |
| Triticum aestivum | Chr2B | 2 | CH_tae_395 | 4 | 4 | 0.00000000416104 |
| Triticum aestivum | Chr2A | 2 | CH_tae_396 | 4 | 4 | 0.00000000416104 |
| Triticum aestivum | Chr2D | 2 | CH_tae_462 | 4 | 5 | 0.000000020798 |
| Triticum dicoccoides | 2B | 2 | CH_tdi_123 | 4 | 4 | 0.00000000215072 |
| Triticum dicoccoides | 2A | 2 | CH_tdi_286 | 3 | 3 | 0.0000053666 |
| Triticum turgidum | chr2B | 2 | CH_ttu_152 | 4 | 4 | 0.00000000250994 |
| Triticum turgidum | chr2A | 2 | CH_ttu_372 | 3 | 3 | 0.00000594866 |
| Vanilla planifolia | CM028152.1 | 2 | CH_vpl_54 | 4 | 17 | 0.000000201229 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00096.1 | 2 | CH_zjn_63 | 4 | 20 | 0.00000284177 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00001.1 | 2 | CH_zjn_84 | 3 | 5 | 0.0000198841 |
| Zea mays B73 | 7 | 2 | CH_zma_122 | 3 | 4 | 0.00000878222 |
| Zea mays B73 | 4 | 2 | CH_zma_132 | 3 | 5 | 0.0000219495 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |