Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.APC superfamily.SulP family.sulfate transporter (SULTR)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Anthoceros agrestis | Sc2ySwM_344 | 1 | CH_aag_182 | 2 | 3 | 0.000722263 |
| Allium sativum | chr6 | 1 | CH_asa_259 | 3 | 3 | 0.00000153191 |
| Cenchrus purpureus | GWHAORA00000006 | 1 | CH_cpu_404 | 3 | 3 | 0.00000220762 |
| Cenchrus purpureus | GWHAORA00000012 | 1 | CH_cpu_434 | 4 | 21 | 0.00000386474 |
| Digitaria exilis | Dexi_CM05836_chr09B | 1 | CH_dex_289 | 3 | 3 | 0.00000296712 |
| Marchantia polymorpha | scaffold_12 | 1 | CH_mpo_28 | 3 | 3 | 0.0000000731891 |
| Miscanthus sinensis | Chr02 | 1 | CH_msi_213 | 3 | 3 | 0.0000017729 |
| Miscanthus sinensis | Chr04 | 1 | CH_msi_214 | 3 | 3 | 0.0000017729 |
| Oryza alta | GWHAZTO00000003 | 1 | CH_oal_108 | 4 | 6 | 0.00000000646018 |
| Oryza alta | GWHAZTO00000001 | 1 | CH_oal_182 | 4 | 12 | 0.000000212936 |
| Oryza alta | GWHAZTO00000013 | 1 | CH_oal_245 | 3 | 3 | 0.00000178168 |
| Oryza brachyantha | 3 | 1 | CH_obr_63 | 4 | 7 | 0.0000000159908 |
| Oryza sativa ssp. indica | Chr3 | 1 | CH_osaindica_73 | 4 | 7 | 0.0000000071625 |
| Oryza sativa Kitaake | Chr3 | 1 | CH_osak_122 | 4 | 6 | 0.00000000397071 |
| Oryza sativa ssp. japonica | chr03 | 1 | CH_osa_85 | 4 | 9 | 0.000000039771 |
| Phyllostachys edulis | hic_scaffold_15 | 1 | CH_ped_199 | 3 | 3 | 0.00000241316 |
| Panicum hallii | Chr09 | 1 | CH_pha_158 | 3 | 3 | 0.000000835799 |
| Sorghum bicolor | Chr01 | 1 | CH_sbi_210 | 3 | 4 | 0.00000340694 |
| Secale cereale | GWHASIY00000007 | 1 | CH_sce_284 | 3 | 3 | 0.000000889292 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_635 | 3 | 4 | 0.00000313206 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_661 | 3 | 5 | 0.00000782868 |
| Setaria italica | scaffold_9 | 1 | CH_sit_245 | 3 | 6 | 0.0000121223 |
| Spirodela polyrhiza | pseudo20 | 1 | CH_spo_80 | 3 | 3 | 0.000000872631 |
| Saccharum spontaneum | Chr1B | 1 | CH_ssp_424 | 3 | 3 | 0.00000346677 |
| Saccharum spontaneum | Chr1D | 1 | CH_ssp_531 | 3 | 4 | 0.0000138636 |
| Setaria viridis | Chr_09 | 1 | CH_svi_204 | 3 | 4 | 0.00000269494 |
| Triticum aestivum | Chr4B | 1 | CH_tae_748 | 3 | 3 | 0.00000314107 |
| Triticum aestivum | Chr4A | 1 | CH_tae_749 | 3 | 3 | 0.00000314107 |
| Triticum aestivum | Chr4D | 1 | CH_tae_750 | 3 | 3 | 0.00000314107 |
| Triticum dicoccoides | 4A | 1 | CH_tdi_249 | 3 | 3 | 0.00000175802 |
| Triticum dicoccoides | 4B | 1 | CH_tdi_250 | 3 | 3 | 0.00000175802 |
| Anthoceros agrestis | Sc2ySwM_344 | 2 | CH_aag_182 | 2 | 3 | 0.000722263 |
| Allium sativum | chr6 | 2 | CH_asa_259 | 3 | 3 | 0.00000153191 |
| Cenchrus purpureus | GWHAORA00000006 | 2 | CH_cpu_404 | 3 | 3 | 0.00000220762 |
| Cenchrus purpureus | GWHAORA00000012 | 2 | CH_cpu_434 | 4 | 21 | 0.00000386474 |
| Digitaria exilis | Dexi_CM05836_chr09B | 2 | CH_dex_289 | 3 | 3 | 0.00000296712 |
| Marchantia polymorpha | scaffold_12 | 2 | CH_mpo_28 | 3 | 3 | 0.0000000731891 |
| Miscanthus sinensis | Chr02 | 2 | CH_msi_213 | 3 | 3 | 0.0000017729 |
| Miscanthus sinensis | Chr04 | 2 | CH_msi_214 | 3 | 3 | 0.0000017729 |
| Oryza alta | GWHAZTO00000003 | 2 | CH_oal_108 | 4 | 6 | 0.00000000646018 |
| Oryza alta | GWHAZTO00000001 | 2 | CH_oal_182 | 4 | 12 | 0.000000212936 |
| Oryza alta | GWHAZTO00000013 | 2 | CH_oal_245 | 3 | 3 | 0.00000178168 |
| Oryza brachyantha | 3 | 2 | CH_obr_63 | 4 | 7 | 0.0000000159908 |
| Oryza sativa ssp. indica | Chr3 | 2 | CH_osaindica_73 | 4 | 7 | 0.0000000071625 |
| Oryza sativa Kitaake | Chr3 | 2 | CH_osak_122 | 4 | 6 | 0.00000000397071 |
| Oryza sativa ssp. japonica | chr03 | 2 | CH_osa_85 | 4 | 9 | 0.000000039771 |
| Phyllostachys edulis | hic_scaffold_15 | 2 | CH_ped_199 | 3 | 3 | 0.00000241316 |
| Panicum hallii | Chr09 | 2 | CH_pha_158 | 3 | 3 | 0.000000835799 |
| Sorghum bicolor | Chr01 | 2 | CH_sbi_210 | 3 | 4 | 0.00000340694 |
| Secale cereale | GWHASIY00000007 | 2 | CH_sce_284 | 3 | 3 | 0.000000889292 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_635 | 3 | 4 | 0.00000313206 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_661 | 3 | 5 | 0.00000782868 |
| Setaria italica | scaffold_9 | 2 | CH_sit_245 | 3 | 6 | 0.0000121223 |
| Spirodela polyrhiza | pseudo20 | 2 | CH_spo_80 | 3 | 3 | 0.000000872631 |
| Saccharum spontaneum | Chr1B | 2 | CH_ssp_424 | 3 | 3 | 0.00000346677 |
| Saccharum spontaneum | Chr1D | 2 | CH_ssp_531 | 3 | 4 | 0.0000138636 |
| Setaria viridis | Chr_09 | 2 | CH_svi_204 | 3 | 4 | 0.00000269494 |
| Triticum aestivum | Chr4B | 2 | CH_tae_748 | 3 | 3 | 0.00000314107 |
| Triticum aestivum | Chr4A | 2 | CH_tae_749 | 3 | 3 | 0.00000314107 |
| Triticum aestivum | Chr4D | 2 | CH_tae_750 | 3 | 3 | 0.00000314107 |
| Triticum dicoccoides | 4A | 2 | CH_tdi_249 | 3 | 3 | 0.00000175802 |
| Triticum dicoccoides | 4B | 2 | CH_tdi_250 | 3 | 3 | 0.00000175802 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |