Interactive Phylogenetics Module

Gene Id
LOC_Os10g34750

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os10g34750 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1372.8 784 100.0
OsR498G1018951400.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1372.8 784 100.0
OB10G21140 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1219.1 637 96.2
Sspon.01G0020010-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1196.0 788 84.8
HORVU1Hr1G044350 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1194.1 786 86.1
TraesCS1D02G172600 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1191.8 790 86.8
Misin01G188300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1189.9 638 92.9
Misin02G189500 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1188.7 787 84.9
TraesCS1A02G172100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1184.9 791 85.0
Seita.9G212100 Setaria italica HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1183.7 632 93.5
TraesCS1B02G184700 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1181.8 786 85.8
Sobic.001G211500 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1181.0 631 93.3
Bradi3g29530 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1178.3 627 93.8
Sspon.01G0019980-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1178.3 788 87.2
LP020896 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1153.3 635 90.6
Zm00008a004117 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1152.1 629 91.7
Pgl_GLEAN_10028670 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1151.7 616 93.3
Zm00007a00014538 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1146.7 617 92.7
Sspon.01G0020010-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1132.5 787 81.7
TRITD1Bv1G107980 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1115.9 752 85.4
Sspon.01G0020010-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1110.9 638 88.4
Zm00001d032632 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1106.3 629 88.9
Aco007673 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1096.3 636 86.3
Ma04_g22700 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 0.0e+00 1085.1 635 85.2
TRITD1Av1G110770 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 6.5e-307 1055.8 726 83.7
Spipo16G0032600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 5.2e-304 1046.2 635 80.9
ASH_gene2944 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 7.7e-300 1032.3 638 81.3
PEQU_15249 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 7.0e-293 1009.2 638 79.0
Zosma34g01290 Zostera marina HOM04x5M001747 ORTHO04x5M002018 4.5e-292 1006.5 639 78.1
CALSI_Maker00032487 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 1.8e-280 968.0 639 76.4
PH01001204G0070 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.4e-277 958.4 574 85.9
Potri.009G005900 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 4.6e-276 953.4 637 73.6
GSVIVG01031470001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 1.0e-275 952.2 629 74.9
ATR0329G039 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 3.0e-275 950.7 633 74.9
Solyc11g066370.1 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 9.5e-274 945.7 625 73.4
AT1G08130 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 1.9e-266 921.4 622 71.5
gene13434 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 2.0e-255 884.8 626 69.5
Pp3c13_20200 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 7.6e-255 882.9 628 68.5
Pp3c13_20209 Physcomitrium patens HOM04x5M001747 ORTHO04x5M002018 7.6e-255 882.9 628 68.5
gene26512 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 7.6e-255 882.9 626 69.2
Mapoly0033s0129 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 8.4e-254 879.4 628 69.3
evm.TU.AsparagusV1_04.2270.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 7.4e-234 813.1 487 84.2
AT1G49250 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 7.9e-220 766.5 589 63.8
Sspon.01G0019980-2B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.4e-216 755.7 579 79.1
Oropetium_20150105_11084 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 2.0e-202 708.8 635 62.5
MCO11G338 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 4.2e-197 691.0 616 57.8
Cre07.g325716 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 1.5e-181 639.4 633 52.1
PH01000186G0040 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 1.7e-150 536.2 483 79.1
gene13766 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 1.1e-139 500.4 646 40.9
Mapoly0069s0045 Marchantia polymorpha HOM04x5M001747 ORTHO04x5M002018 1.8e-139 499.6 660 40.8
ATR0691G097 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 4.6e-135 485.0 646 40.4
GSVIVG01030942001 Vitis vinifera HOM04x5M001747 ORTHO04x5M002018 7.8e-135 484.2 640 39.8
TraesCS3D02G265000 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.0e-134 483.8 637 38.8
TraesCS3A02G264800 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 1.3e-134 483.4 637 38.6
TRITD3Av1G176280 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 1.3e-134 483.4 637 38.6
Bradi2g46780 Brachypodium distachyon HOM04x5M001747 ORTHO04x5M002018 5.1e-134 481.5 637 39.1
Misin06G224100 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 6.6e-134 481.1 652 37.4
OB01G36030 Oryza brachyantha HOM04x5M001747 ORTHO04x5M002018 1.5e-133 479.9 637 38.3
TraesCS3B02G298100 Triticum aestivum HOM04x5M001747 ORTHO04x5M002018 2.5e-133 479.2 632 38.8
HORVU3Hr1G063470 Hordeum vulgare HOM04x5M001747 ORTHO04x5M002018 3.3e-133 478.8 652 37.6
OsR498G0101784200.01 Oryza sativa ssp. indica HOM04x5M001747 ORTHO04x5M002018 3.3e-133 478.8 637 38.3
TRITD3Bv1G156800 Triticum turgidum HOM04x5M001747 ORTHO04x5M002018 4.3e-133 478.4 637 38.5
AT1G66730 Arabidopsis thaliana HOM04x5M001747 ORTHO04x5M002018 6.2e-132 474.6 639 39.6
LP029527 Lolium perenne HOM04x5M001747 ORTHO04x5M002018 8.1e-132 474.2 637 37.8
Seita.5G274300 Setaria italica HOM04x5M001747 ORTHO04x5M002018 8.1e-132 474.2 652 37.6
Solyc02g091120.2 Solanum lycopersicum HOM04x5M001747 ORTHO04x5M002018 1.8e-131 473.0 667 37.3
ASH_gene7517 Apostasia shenzhenica HOM04x5M001747 ORTHO04x5M002018 6.9e-131 471.1 639 38.3
Ma04_g00670 Musa acuminata HOM04x5M001747 ORTHO04x5M002018 1.2e-130 470.3 654 38.2
CALSI_Maker00050199 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M002018 2.0e-130 469.5 652 38.3
Sspon.01G0019980-3C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 5.4e-128 461.5 268 86.2
LOC_Os01g49180 Oryza sativa ssp. japonica HOM04x5M001747 ORTHO04x5M002018 7.9e-119 431.0 702 34.0
PEQU_31644 Phalaenopsis equestris HOM04x5M001747 ORTHO04x5M002018 7.9e-119 431.0 653 36.4
Pgl_GLEAN_10032519 Cenchrus americanus HOM04x5M001747 ORTHO04x5M002018 5.5e-112 408.3 636 34.7
gene13033 Selaginella moellendorffii HOM04x5M001747 ORTHO04x5M002018 5.5e-112 408.3 529 41.0
Sobic.003G260400 Sorghum bicolor HOM04x5M001747 ORTHO04x5M002018 1.6e-111 406.8 557 37.3
Zjn_sc00017.1.g06380.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 1.9e-101 373.2 639 41.9
Oropetium_20150105_11565 Oropetium thomaeum HOM04x5M001747 ORTHO04x5M002018 4.3e-101 372.1 637 32.8
Potri.004G094300 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 1.6e-100 370.2 470 39.8
MCO09G458 Micromonas commoda HOM04x5M001747 ORTHO04x5M002018 5.0e-97 358.6 608 37.8
PH01000704G0390 Phyllostachys edulis HOM04x5M001747 ORTHO04x5M002018 9.7e-85 317.8 463 36.5
Sspon.03G0031770-1B Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.7e-84 317.0 414 39.1
Cre06.g278177 Chlamydomonas reinhardtii HOM04x5M001747 ORTHO04x5M002018 8.0e-63 245.0 1023 22.7
p5.00_sc00008_p0159 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 2.2e-60 236.9 358 35.2
Zm00008a014124 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.2e-58 231.1 259 40.9
Aco000044 Ananas comosus HOM04x5M001747 ORTHO04x5M002018 2.0e-58 230.3 427 32.6
Zm00001d043835 Zea mays B73 HOM04x5M001747 ORTHO04x5M002018 8.6e-57 224.9 408 31.6
Sspon.03G0031770-2C Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.8e-53 211.5 403 31.5
PAB00005808 Picea abies HOM04x5M001747 ORTHO04x5M002018 1.4e-51 207.6 197 45.7
evm.TU.AsparagusV1_09.814.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.6e-50 202.6 436 29.6
p5.00_sc00008_p0160 Elaeis guineensis HOM04x5M001747 ORTHO04x5M002018 1.1e-48 198.0 200 46.5
ATR0749G104 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 8.0e-47 191.8 109 82.6
Spipo19G0024700 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 3.1e-46 189.9 254 39.4
ATR0749G050 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 2.0e-45 187.2 128 75.0
PAB00000364 Picea abies HOM04x5M001747 ORTHO04x5M002018 4.9e-44 182.6 116 75.0
Zm00007a00029335 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 3.9e-41 172.9 276 34.4
PAB00001978 Picea abies HOM04x5M001747 ORTHO04x5M002018 2.3e-38 163.7 114 71.9
PAB00036263 Picea abies HOM04x5M001747 ORTHO04x5M002018 2.4e-35 153.7 90 77.8
Spipo19G0024800 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M002018 4.3e-32 142.9 228 36.8
Pp3c14_5920 Physcomitrium patens HOM04x5M004601 ORTHO04x5M005443 4.7e-31 139.4 584 24.3
Pgl_GLEAN_10020369 Cenchrus americanus HOM04x5M004601 ORTHO04x5M005443 4.0e-30 136.3 573 24.4
TraesCS2A02G431800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 5.2e-30 136.0 582 24.6
PAB00006638 Picea abies HOM04x5M001747 ORTHO04x5M002018 6.8e-30 135.6 176 36.9
TraesCS2D02G429800 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 2.0e-29 134.0 584 24.1
Potri.018G141900 Populus trichocarpa HOM04x5M004601 ORTHO04x5M005443 2.9e-28 130.2 379 28.0
Sobic.006G207300 Sorghum bicolor HOM04x5M004601 ORTHO04x5M005443 2.9e-28 130.2 584 23.3
TRITD2Bv1G212650 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 2.9e-28 130.2 588 24.8
Bradi5g20927 Brachypodium distachyon HOM04x5M004601 ORTHO04x5M005443 3.8e-28 129.8 586 23.9
TraesCS2B02G453300 Triticum aestivum HOM04x5M004601 ORTHO04x5M005443 4.9e-28 129.4 378 28.0
GSVIVG01029314001 Vitis vinifera HOM04x5M004601 ORTHO04x5M005443 4.9e-28 129.4 381 28.1
PEQU_25681 Phalaenopsis equestris HOM04x5M004601 ORTHO04x5M005443 1.1e-27 128.3 395 28.1
AT5G57160 Arabidopsis thaliana HOM04x5M004601 ORTHO04x5M005443 1.9e-27 127.5 382 28.3
TRITD2Av1G250540 Triticum turgidum HOM04x5M004601 ORTHO04x5M005443 5.4e-27 125.9 380 28.2
LP005256 Lolium perenne HOM04x5M004601 ORTHO04x5M005443 1.2e-26 124.8 581 24.8
Spipo28G0023000 Spirodela polyrhiza HOM04x5M004601 ORTHO04x5M005443 1.2e-26 124.8 501 23.4
Zjn_sc00023.1.g02440.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004601 ORTHO04x5M005443 1.6e-26 124.4 381 27.6
ATR0626G236 Amborella trichopoda HOM04x5M004601 ORTHO04x5M005443 2.1e-26 124.0 613 23.3
Ma01_g18780 Musa acuminata HOM04x5M004601 ORTHO04x5M005443 7.8e-26 122.1 380 26.1
Zm00008a014123 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 1.0e-25 121.7 155 38.7
Seita.7G229000 Setaria italica HOM04x5M004601 ORTHO04x5M005443 1.3e-25 121.3 407 26.3
Solyc07g017990.2 Solanum lycopersicum HOM04x5M004601 ORTHO04x5M005443 1.7e-25 120.9 339 27.1
PAB00058901 Picea abies HOM04x5M001747 ORTHO04x5M002018 2.3e-25 120.6 65 87.7
PH01000224G0720 Phyllostachys edulis HOM04x5M004601 ORTHO04x5M005443 2.3e-25 120.6 385 27.0
Mapoly0001s0137 Marchantia polymorpha HOM04x5M004601 ORTHO04x5M005443 5.1e-25 119.4 402 26.1
Zjn_sc00011.1.g00310.1.cf.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001747 ORTHO04x5M002018 1.5e-24 117.9 157 36.9
Zm00001d002390 Zea mays B73 HOM04x5M004601 ORTHO04x5M005443 1.5e-24 117.9 375 27.2
evm.TU.AsparagusV1_01.2163.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 4.3e-24 116.3 98 50.0
Potri.004G094200 Populus trichocarpa HOM04x5M001747 ORTHO04x5M002018 7.3e-24 115.5 143 39.2
evm.TU.AsparagusV1_08.2229.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.1e-23 114.0 94 50.0
Zm00007a00034356 Zea mays B104 HOM04x5M004601 ORTHO04x5M005443 1.4e-22 111.3 362 27.3
Sspon.03G0009130-1A Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 1.8e-22 110.9 155 35.5
OsR498G0409240600.01 Oryza sativa ssp. indica HOM04x5M004601 ORTHO04x5M005443 2.2e-20 104.0 452 24.1
CALSI_Maker00020618 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 2.9e-20 103.6 140 39.3
Oropetium_20150105_01621 Oropetium thomaeum HOM04x5M004601 ORTHO04x5M005443 6.0e-18 95.9 384 25.5
OB04G31400 Oryza brachyantha HOM04x5M004601 ORTHO04x5M005443 1.7e-17 94.4 197 33.5
Zm00008a014122 Zea mays PH207 HOM04x5M001747 ORTHO04x5M002018 2.5e-16 90.5 123 36.6
Cre10.g433550 Chlamydomonas reinhardtii HOM04x5M004601 ORTHO04x5M005443 9.6e-16 88.6 429 23.3
evm.TU.AsparagusV1_04.1989.V1.1 Asparagus officinalis HOM04x5M001747 ORTHO04x5M002018 2.1e-15 87.4 69 53.6
Zm00007a00052093 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 2.1e-15 87.4 86 41.9
Misin05G212300 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 4.8e-15 86.3 86 41.9
ATR0749G026 Amborella trichopoda HOM04x5M001747 ORTHO04x5M002018 5.3e-14 82.8 55 72.7
Sspon.03G0031770-3D Saccharum spontaneum HOM04x5M001747 ORTHO04x5M002018 9.3e-11 72.0 251 24.3
CALSI_Maker00003384 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 1.0e-09 68.6 72 43.1
CALSI_Maker00023721 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 1.3e-09 68.2 65 47.7
Zm00007a00029334 Zea mays B104 HOM04x5M001747 ORTHO04x5M002018 3.0e-09 67.0 71 45.1
Misin05G212200 Miscanthus sinensis HOM04x5M001747 ORTHO04x5M002018 3.9e-09 66.6 189 24.9
CALSI_Maker00001347 Calamus simplicifolius HOM04x5M001747 ORTHO04x5M013120 5.1e-09 66.2 68 42.6
Spipo0G0169600 Spirodela polyrhiza HOM04x5M001747 ORTHO04x5M013120 1.9e-08 64.3 89 37.1

Amborella trichopoda (6 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (5 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (3 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (3 genes)
Picea abies (6 genes)
Populus trichocarpa (4 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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