Publications

Citation Policy

Please cite one of the following papers to reference the PLAZA project, depending on the instances used:
  • Plants: Van Bel, M., Silvestri, F., Weitz, E. M., Kreft, L., Botzki, A., Coppens, F., Vandepoele, K. (2022) PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants Nucleic Acids Res.
  • Green algae: * Vandepoele, K., * Van Bel, M., Richard, G., Van Landeghem, S., Verhelst, B., Moreau, H., Van de Peer, Y., Grimsley, N., Piganeau, G. (2013) pico-PLAZA, a genome database of microbial photosynthetic eukaryotes. Environmental Microbiology 15(8):2147-53 *contributed equally
  • Diatoms: Osuna-Cruz, C. M., Bilcke, G., Vancaester, E., De Decker, S., Bones, A., Winge, P., Poulsen, N., Bulankova, P., Verhelst, B., Audoor, S., Belisova, D., Pargana, A., Russo, M., Stock, F., Cirri, E., Brembu, T., Pohnert, G., Piganeau, G., Immacolata, M., Mock, T., Sterck, L., Sabbe, K., De Veylder, L., * Vyverman, W., * Vandepoele, K. (2020) The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms Nature Communications *contributed equally

Core Publications

  • Van Bel, M., Silvestri, F., Weitz, E. M., Kreft, L., Botzki, A., Coppens, F., Vandepoele, K. (2022) PLAZA 5.0: extending the scope and power of comparative and functional genomics in plants Nucleic Acids Res. (accepted for publication)
  • Van Bel, M., Diels, T., Vancaester, E., Kreft, L., Botzki, A., Van de Peer, Y., Coppens, F., Vandepoele, K. (2017) PLAZA 4.0: an integrative resource for functional, evolutionary and comparative plant genomics Nucleic Acids Res.
  • * Proost, S., * Van Bel, M., Vaneechoutte, D., Van de Peer, Y., InzĂ©, D., Mueller-Roeber, B., Vandepoele, K. (2014) PLAZA 3.0: an access point for plant comparative genomics. Nucleic Acids Res. 43(Database issue):D974-81 *contributed equally
  • * Van Bel, M., * Proost, S., Wischnitzki, E., Movahedi, S., Scheerlinck, C., Van de Peer, Y., Vandepoele, K. (2012) Dissecting plant genomes with the PLAZA comparative genomics platform. Plant Physiol. 158(2):590-600 *contributed equally
  • * Proost, S., * Van Bel, M., Sterk, L., Billiau, K., Van Parys, T., Van de Peer, Y., Vandepoele, K. (2009) PLAZA: a comparative genomics resource to study gene and genome evolution in plants. Plant Cell. 21(12):3718-31 *contributed equally

Associated Publications

  • Van de Velde, J., Van Bel, M., Vaneechoutte, D., Vandepoele, K. (2016) A Collection of Conserved Non-Coding Sequences to Study Gene Regulation in Flowering Plants Plant Physiol. 171(4):2586-98
  • Osuna-Cruz, C. M., Bilcke, G., Vancaester, E., De Decker, S., Bones, A., Winge, P., Poulsen, N., Bulankova, P., Verhelst, B., Audoor, S., Belisova, D., Pargana, A., Russo, M., Stock, F., Cirri, E., Brembu, T., Pohnert, G., Piganeau, G., Immacolata, M., Mock, T., Sterck, L., Sabbe, K., De Veylder, L., * Vyverman, W., * Vandepoele, K. (2020) The Seminavis robusta genome provides insights into the evolutionary adaptations of benthic diatoms Nature Communications *contributed equally

Training Material