Arabidopsis thaliana

Arabidopsis thaliana, or the mouse-ear cress, is to plant sciences, what mouse is to animal biology. It has all features to make it a perfect model organism and has, despite several recent genome duplications, a very small genome. Additionally several techniques to manipulate these plants and their genome made it the perfect candidate to be the first plant to have it's genome sequenced.
Publication:
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.
Info and Links
Source | Araport11 |
PLAZA identifier | ath |
NCBI link | Arabidopsis thaliana |
Mitochondrion | Y08501 |
Chloroplast | AP000423 |
Toolbox



Annotations
Page 1 of 3491, showing 20 records out of 69810 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
ATMG00490 | ATMG00490.1 | 130817 | 131140 | + | ChrM | coding | HOM04x5M007130 | ORTHO04x5M009329 |
ATMG01340 | ATMG01340.1 | 337669 | 337741 | + | ChrM | rna | Not Available | Not Available |
ATMG00310 | ATMG00310.1 | 90883 | 91347 | - | ChrM | coding | HOM04x5M000015 | ORTHO04x5M000089 |
ATMG00680 | ATMG00680.1 | 201729 | 202097 | + | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG00650 | ATMG00650.1 | 188929 | 189231 | - | ChrM | coding | HOM04x5M006758 | ORTHO04x5M008739 |
ATMG01410 | ATMG01410.1 | 366086 | 366700 | - | ChrM | coding | HOM04x5M007130 | ORTHO04x5M009329 |
ATMG00620 | ATMG00620.1 | 182278 | 182697 | + | ChrM | coding | HOM04x5M017093 | ORTHO04x5M012330 |
ATMG00760 | ATMG00760.1 | 221700 | 222029 | - | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG01270 | ATMG01270.1 | 314627 | 315073 | + | ChrM | coding | HOM04x5M004844 | ORTHO04x5M005890 |
ATMG00350 | ATMG00350.1 | 104457 | 104531 | + | ChrM | rna | Not Available | Not Available |
ATMG00940 | ATMG00940.1 | 251403 | 251897 | - | ChrM | coding | HOM04x5M000099 | Orphan Gene |
ATMG01370 | ATMG01370.1 | 360717 | 361052 | - | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG01100 | ATMG01100.1 | 281614 | 281931 | + | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG00300 | ATMG00300.1 | 89617 | 90054 | - | ChrM | coding | HOM04x5M002995 | ORTHO04x5M000028 |
ATMG00010 | ATMG00010.1 | 273 | 734 | - | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG00665 | ATMG00665.1 | 190740 | 190761 | - | ChrM | coding | Orphan Gene | Orphan Gene |
ATMG09730 | ATMG09730.1 | 181268 | 181347 | + | ChrM | rna | Not Available | Not Available |
ATMG00890 | ATMG00890.1 | 239636 | 239956 | - | ChrM | coding | HOM04x5M004170 | Orphan Gene |
ATMG00250 | ATMG00250.1 | 71453 | 71526 | + | ChrM | rna | Not Available | Not Available |
ATMG00340 | ATMG00340.1 | 104221 | 104295 | + | ChrM | rna | Not Available | Not Available |